RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TTC14Q96N46 770 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 WDFY2Q96P53 400 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 TUBB6Q9BUF5 446 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZNF747Q9BV97 191 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 NUF2Q9BZD4 464 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 KLK15Q9H2R5 256 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 PLEKHA4Q9H4M7 779 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 KIF9Q9HAQ2 790 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 MOV10Q9HCE1 1003 aaKnown RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZNF304Q9HCX3 659 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 BPIFA1Q9NP55 256 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 SH3GLB2Q9NR46 395 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 IL17RBQ9NRM6 502 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 OGFRQ9NZT2 677 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 ABI3Q9P2A4 366 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZHX1Q9UKY1 873 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 INSL6Q9Y581 213 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 PTPRGP23470 1445 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 ADGRF5Q8IZF2 1346 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 RAPGEF6Q8TEU7 1601 aa4.94□□□□□ -1.62
HMGB3P18-201ENST00000406327 LOC100509620A0A075B734 347 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 A0A0A0MQY5 61 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 GLOD5A6NK44 160 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 C2CD4BA6NLJ0 364 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 H7C0S8 307 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 SH2B2O14492 632 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 FOXN1O15353 648 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 PROP1O75360 226 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 SRPRAP08240 638 aaKnown RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 UNGP13051 313 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZNF182P17025 639 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 CTPS1P17812 591 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 EEF1DP29692 281 aaKnown RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 RFC1P35251 1148 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 COPB2P35606 906 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 IRF3Q14653 427 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 PGM5Q15124 567 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 PCGF3Q3KNV8 242 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 C6orf141Q5SZD1 244 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 LRCH2Q5VUJ6 765 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 GARNL3Q5VVW2 1013 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 DNAAF5Q86Y56 855 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 LURAP1LQ8IV03 231 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 RNF168Q8IYW5 571 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 CADM3Q8N126 398 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZCCHC9Q8N567 271 aaKnown RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC25A41Q8N5S1 370 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 NKAIN3Q8N8D7 197 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 AVL9Q8NBF6 648 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 KAT2AQ92830 837 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 ATOH1Q92858 354 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZFYVE19Q96K21 471 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 HARBI1Q96MB7 349 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZMAT2Q96NC0 199 aaKnown RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 FAM118BQ9BPY3 351 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 PIMREGQ9BSJ6 248 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 IKZF4Q9H2S9 585 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 PDE7BQ9NP56 450 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 TAB2Q9NYJ8 693 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 PLK2Q9NYY3 685 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 ARPP21Q9UBL0 812 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 SEL1LQ9UBV2 794 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 LAMP3Q9UQV4 416 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZNF711Q9Y462 761 aa4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 DENND4BO75064 1496 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P18-201ENST00000406327 ANKRD30BQ9BXX2 1392 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 NCOA1Q15788 1441 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 A0A087X1B8 175 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 A8MV72 311 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 NPIPB11E5RHQ5 1161 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 SNAP23O00161 211 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 CTDSP2O14595 271 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 TP73O15350 636 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLC25A17O43808 307 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 RAMP2O60895 175 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 GABRB1P18505 474 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 RYKP34925 604 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 NRIP1P48552 1158 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 CAMPP49913 170 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 MFAP4P55083 255 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 RPS13P62277 151 aaKnown RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 ACSM2AQ08AH3 577 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 STIM1Q13586 685 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 NAB2Q15742 525 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 PLEKHO1Q53GL0 409 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 BMP2KLQ5H9B9 411 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 TCP11X2Q5H9J9 407 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 EARS2Q5JPH6 523 aaKnown RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 ACSM2BQ68CK6 577 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 KDELC2Q7Z4H8 507 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 TDRPQ86YL5 185 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 DENND6AQ8IWF6 608 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 FAM9BQ8IZU0 186 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 SYT2Q8N9I0 419 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 RASSF8Q8NHQ8 419 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 GABPB2Q8TAK5 448 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 FBXL8Q96CD0 374 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZNF653Q96CK0 615 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 ZNF419Q96HQ0 510 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 SPATA17Q96L03 361 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms