RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 MED13Q9UHV7 2174 aa15.36■□□□□ 0.05
SYNGR1-205ENST00000406293 SPENQ96T58 3664 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 CD44P16070 742 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 ITIH2P19823 946 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 XPAP23025 273 aaPredicted RBP15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 MAP4P27816 1152 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 PMS1P54277 932 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 MAZP56270 477 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 SLC20A2Q08357 652 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 MTA1Q13330 715 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 EIF4EBP2Q13542 120 aaPredicted RBP15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 EIF2S3LQ2VIR3 472 aaKnown RBP15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 ANKS6Q68DC2 871 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 SPECC1LQ69YQ0 1117 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 TCTN3Q6NUS6 607 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 KAT5Q92993 513 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 MOCOSQ96EN8 888 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 PDXPQ96GD0 296 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 NT5C1BQ96P26 610 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 LMBRD1Q9NUN5 540 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 OCIAD1Q9NX40 245 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 COQ4Q9Y3A0 265 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 KCTD3Q9Y597 815 aa15.35■□□□□ 0.05
SYNGR1-205ENST00000406293 ESPL1Q14674 2120 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 CLDN1O95832 211 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 PCCBP05166 539 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 MCCD1P59942 119 aaPredicted RBP15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 INPP5AQ14642 412 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 NKAIN2Q5VXU1 208 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 ISM2Q6H9L7 571 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 IRF2BP1Q8IU81 584 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 PRR7Q8TB68 274 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 KIAA1524Q8TCG1 905 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 CTRCQ99895 268 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 SUDS3Q9H7L9 328 aaPredicted RBP15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 MAP10Q9P2G4 905 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 PILRAQ9UKJ1 303 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 PCDHB3Q9Y5E6 796 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 KCNMB2Q9Y691 235 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 CRYBG3Q68DQ2 2970 aa15.34■□□□□ 0.05
SYNGR1-205ENST00000406293 PPP1R3GB7ZBB8 358 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 AREL1O15033 823 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 RPL34P49207 117 aaKnown RBP15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 LIMK2P53671 638 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 RAB15P59190 212 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 ARF5P84085 180 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 TRA2AQ13595 282 aaKnown RBP eCLIP15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 POLD3Q15054 466 aaPredicted RBP15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 CAMK4Q16566 473 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 WSCD2Q2TBF2 565 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 C5orf22Q49AR2 442 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 KCTD16Q68DU8 428 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 OR1E3Q8WZA6 343 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 SLC4A5Q9BY07 1137 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 TKTL2Q9H0I9 626 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 TMEM168Q9H0V1 697 aa15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 MRPL40Q9NQ50 206 aaKnown RBP15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 MRPS18BQ9Y676 258 aaKnown RBP15.33■□□□□ 0.04
SYNGR1-205ENST00000406293 TRIM49BA6NDI0 452 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 BIN1O00499 593 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 SRGAP2O75044 1071 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 KRT5P13647 590 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 PPP1R2P41236 205 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 SNRPD1P62314 119 aaKnown RBP15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 LRRC63Q05C16 580 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 NAA30Q147X3 362 aaPredicted RBP15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 C1QL3Q5VWW1 255 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 ANKRD40Q6AI12 368 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 GDPD4Q6W3E5 623 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 RRAGAQ7L523 313 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 CCL4L1Q8NHW4 92 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 PDCD6IPQ8WUM4 868 aaKnown RBP15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 DHTKD1Q96HY7 919 aaPredicted RBP15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 GBP4Q96PP9 640 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 OSBPL1AQ9BXW6 950 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 CLSTN2Q9H4D0 955 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 WDCPQ9H6R7 721 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 KIAA1468Q9P260 1216 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 ITPR3Q14573 2671 aa15.32■□□□□ 0.04
SYNGR1-205ENST00000406293 CHD5Q8TDI0 1954 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 ILVBLA1L0T0 632 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 CACNB4O00305 520 aaPredicted RBP15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 PSMA7O14818 248 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 RFPL1O75677 317 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 ZMPSTE24O75844 475 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 POP4O95707 220 aaKnown RBP15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 TIMP2P16035 220 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 CD1CP29017 333 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 ABHD18Q0P651 414 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 MRPL49Q13405 166 aaKnown RBP15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 STIM1Q13586 685 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 CLPPQ16740 277 aaPredicted RBP15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 MYLK3Q32MK0 819 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 EFHC1Q5JVL4 640 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 SNAP47Q5SQN1 464 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 FOXR2Q6PJQ5 311 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 LEKR1Q6ZMV7 388 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 TMEM110Q86TL2 294 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 DRC7Q8IY82 874 aa15.31■□□□□ 0.04
SYNGR1-205ENST00000406293 OR56A4Q8NGH8 313 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms