RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	THAP1	Q9NVV9	213 aa		29.16	■■■□□ 2.26
CSNK1E-205	ENST00000405675	TLK1	Q9UKI8	766 aa		29.16	■■■□□ 2.26
CSNK1E-205	ENST00000405675	INSIG1	O15503	277 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	ZMPSTE24	O75844	475 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	KIT	P10721	976 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	MYL4	P12829	197 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	ARRB2	P32121	409 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	GPATCH11	Q8N954	259 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	HJURP	Q8NCD3	748 aa	Predicted RBP	29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	ELMO2	Q96JJ3	720 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	PBX4	Q9BYU1	374 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	NMRAL1	Q9HBL8	299 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	HEY2	Q9UBP5	337 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	TRIM33	Q9UPN9	1127 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	ANKRD6	Q9Y2G4	727 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675		A0A1W2PRU2	124 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	NDST3	O95803	873 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	RBM20	Q5T481	1227 aa	Known RBP	29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	CRLF3	Q8IUI8	442 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	KCTD4	Q8WVF5	259 aa		29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	MRPS31	Q92665	395 aa	Known RBP	29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	TMA16	Q96EY4	203 aa	Known RBP	29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	SUDS3	Q9H7L9	328 aa	Predicted RBP	29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	MARCH4	Q9P2E8	410 aa	Predicted RBP	29.15	■■■□□ 2.26
CSNK1E-205	ENST00000405675	SERPINE1	P05121	402 aa		29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	TAS2R39	P59534	338 aa		29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	KIAA0408	Q6ZU52	694 aa		29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	RBM23	Q86U06	439 aa	Known RBP	29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	LDB1	Q86U70	411 aa	Predicted RBP	29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	CENPL	Q8N0S6	344 aa	Predicted RBP	29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	OR6P1	Q8NGX9	317 aa		29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	SLC40A1	Q9NP59	571 aa		29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	SCUBE2	Q9NQ36	999 aa		29.14	■■■□□ 2.26
CSNK1E-205	ENST00000405675	SLC7A4	O43246	635 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	DNAJC6	O75061	913 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	LUC7L3	O95232	432 aa	Known RBP	29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CKM	P06732	381 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SLC1A6	P48664	564 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	RAB10	P61026	200 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ITGA9	Q13797	1035 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TAF1B	Q53T94	588 aa	Predicted RBP	29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TMEM151A	Q8N4L1	468 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	DNAJC1	Q96KC8	554 aa	Known RBP	29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TBATA	Q96M53	351 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SMIM14	Q96QK8	99 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	NDN	Q99608	321 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	FEM1A	Q9BSK4	669 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	MFSD1	Q9H3U5	465 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ASAH2	Q9NR71	780 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	OR51B4	Q9Y5P0	310 aa		29.14	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PRL	P01236	227 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	RALB	P11234	206 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	POLD2	P49005	469 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SLC12A1	Q13621	1099 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SLC14A2	Q15849	920 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	FAM217A	Q8IXS0	508 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CALML6	Q8TD86	181 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PRR11	Q96HE9	360 aa	Predicted RBP	29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	OMD	Q99983	421 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	NKX2-4	Q9H2Z4	354 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TASP1	Q9H6P5	420 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CFAP97	Q9P2B7	532 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CPSF2	Q9P2I0	782 aa	Known RBP	29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ZFP69B	Q9UJL9	534 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SPO11	Q9Y5K1	396 aa		29.13	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TMCC1	O94876	653 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SBK3	P0C264	359 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CCR2	P41597	374 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	LEPR	P48357	1165 aa	Known RBP	29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ACVR1	Q04771	509 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ZNF783	Q6ZMS7	281 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CILP2	Q8IUL8	1156 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	OR13C4	Q8NGS5	318 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	OR6Y1	Q8NGX8	325 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	RUVBL2	Q9Y230	463 aa	Known RBP	29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	STMN1	P16949	149 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SERPINB3	P29508	390 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CSK	P41240	450 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	GLRB	P48167	497 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	DLG1	Q12959	904 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SPATA6L	Q8N4H0	392 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	BRSK1	Q8TDC3	778 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SKA1	Q96BD8	255 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ALG14	Q96F25	216 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SORT1	Q99523	831 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	VPS28	Q9UK41	221 aa		29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	MTCL1	Q9Y4B5	1905 aa	Known RBP	29.12	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PRAME	P78395	509 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SLC7A9	P82251	487 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CLNK	Q7Z7G1	428 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ADGRD2	Q7Z7M1	963 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	BBS7	Q8IWZ6	715 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	NUDCD1	Q96RS6	583 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TDRD1	Q9BXT4	1180 aa	Known RBP	29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	KCNK4	Q9NYG8	393 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ACOT9	Q9Y305	439 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PCDHGC4	Q9Y5F7	938 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CDH23	Q9H251	3354 aa		29.11	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms