RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ZNF786Q8N393 782 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 MAML3Q96JK9 1138 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 FCRL2Q96LA5 508 aaPredicted RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 NSUN5Q96P11 429 aaKnown RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 MRPL57Q9BQC6 102 aaKnown RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 RBM38Q9H0Z9 239 aaKnown RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 MARCH4Q9P2E8 410 aaPredicted RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 CNOT6Q9ULM6 557 aaKnown RBP12.05□□□□□ -0.48
RBM39-206ENST00000403542 COL1A2P08123 1366 aa12.05□□□□□ -0.48
RBM39-206ENST00000403542 ARHGAP10A1A4S6 786 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 IPO13O94829 963 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 ATP6V1B2P21281 511 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CD86P42081 329 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 ARSDP51689 593 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CDKN2DP55273 166 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 WNT3AP56704 352 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 PLIN5Q00G26 463 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 PPIL2Q13356 520 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 UGP2Q16851 508 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 PLA2G4EQ3MJ16 856 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 LPCAT2Q7L5N7 544 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 BHLHA9Q7RTU4 235 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 PIWIL4Q7Z3Z4 852 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 LINC00523Q86TU6 105 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 RETREG3Q86VR2 466 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 NUP93Q8N1F7 819 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 TOP6BLQ8N6T0 577 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 DRAXINQ8NBI3 349 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 RDH11Q8TC12 318 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 GPR152Q8TDT2 470 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 KCTD13Q8WZ19 329 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 NTAN1Q96AB6 310 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 SLC10A4Q96EP9 437 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 HSPBAP1Q96EW2 488 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 TINF2Q9BSI4 451 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 SPAG4Q9NPE6 437 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CNGB3Q9NQW8 809 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 ADARB2Q9NS39 739 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 BCAP29Q9UHQ4 241 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 AAR2Q9Y312 384 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 TRAF6Q9Y4K3 522 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 NCF1BA6NI72 391 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 NCF1CA8MVU1 366 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 J3KR12 359 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 AP1G1O43747 822 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 MAFKO60675 156 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 TRMUO75648 421 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 SNRPB2P08579 225 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 PIM1P11309 404 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 NCF1P14598 390 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 CDH2P19022 906 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 LRP8Q14114 963 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 MFSD10Q14728 455 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 PABPC1LQ4VXU2 614 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 TMEM207Q6UWW9 146 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 GPR142Q7Z601 462 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CBR4Q8N4T8 237 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 HDAC10Q969S8 669 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 ESAMQ96AP7 390 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 B3GALT6Q96L58 329 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 MRGPRX2Q96LB1 330 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 FAM124BQ9H5Z6 455 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 RNF181Q9P0P0 153 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 KCNH4Q9UQ05 1017 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 DMTF1Q9Y222 760 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 TDRKHQ9Y2W6 561 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 A0A1B0GTL3 188 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 SLCO1B7G3V0H7 640 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 MTSS1O43312 755 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 ALDOCP09972 364 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 MTHFD1P11586 935 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 KCNE1P15382 129 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 NCK1P16333 377 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 STX5Q13190 355 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 GRB7Q14451 532 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 C6orf10Q5SRN2 563 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CHSY3Q70JA7 882 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CIR1Q86X95 450 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 SCN4BQ8IWT1 228 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CATSPER1Q8NEC5 780 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CYGBQ8WWM9 190 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 ZFRQ96KR1 1074 aaKnown RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 UNC93B1Q9H1C4 597 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 ZNF696Q9H7X3 374 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 CROTQ9UKG9 612 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.04□□□□□ -0.48
RBM39-206ENST00000403542 CEPT1Q9Y6K0 416 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 SBF1O95248 1867 aa12.04□□□□□ -0.48
RBM39-206ENST00000403542 GABRDO14764 452 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 NRP2O60462 931 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 SRP72O76094 671 aaKnown RBP12.03□□□□□ -0.48
RBM39-206ENST00000403542 HMBSP08397 361 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 LINC00032P0C843 101 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 YAP1P46937 504 aaKnown RBP12.03□□□□□ -0.48
RBM39-206ENST00000403542 NR1H2P55055 460 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 RHDQ02161 417 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 DSC2Q02487 901 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 SCAPQ12770 1279 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 TECRLQ5HYJ1 363 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms