RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 A8MX80 341 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 TRAFD1O14545 582 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 KRT37O76014 449 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 NEBLO76041 1014 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 C6P13671 934 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 SERPINB6P35237 376 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 MMP12P39900 470 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 ACADVLP49748 655 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 LIG3P49916 1009 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 EIF2B5Q13144 721 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 IRF4Q15306 451 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 ANKRD20A8PQ5CZ79 823 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 ZFYVE27Q5T4F4 411 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 NCBP2-AS2Q69YL0 99 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 ERAP2Q6P179 960 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 CNGA4Q8IV77 575 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 ECHDC3Q96DC8 303 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 PNMA8BQ9ULN7 279 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 ATP8A1Q9Y2Q0 1164 aa16.92■□□□□ 0.3
CSNK1D-205ENST00000403276 CSF2P04141 144 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 GIMD1P0DJR0 217 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 MYF5P13349 255 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 CR2P20023 1033 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 AP1S1P61966 158 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 WSCD2Q2TBF2 565 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 PROX2Q3B8N5 592 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 MARC1Q5VT66 337 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 PARGQ86W56 976 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 TC2NQ8N9U0 490 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 PDCD6IPQ8WUM4 868 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 NSMCE1Q8WV22 266 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 RAPGEF5Q92565 580 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 IFT43Q96FT9 208 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 C1QTNF7Q9BXJ2 289 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 TCEAL2Q9H3H9 227 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 NOD2Q9HC29 1040 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 NT5MQ9NPB1 228 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 SCUBE2Q9NQ36 999 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 ZMIZ1Q9ULJ6 1067 aa16.91■□□□□ 0.3
CSNK1D-205ENST00000403276 LRP4O75096 1905 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 LZTS3O60299 673 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 RFPL3O75679 317 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 KRT7P08729 469 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 JUNDP17535 347 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 CKMT2P17540 419 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 KDELR1P24390 212 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 MMP13P45452 471 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 THOP1P52888 689 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 HNRNPKP61978 463 aaKnown RBP eCLIP16.9■□□□□ 0.36e-9■□□□□ 9.6
CSNK1D-205ENST00000403276 RALGDSQ12967 914 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 ZNF211Q13398 564 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 LRRC14Q15048 493 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 PAFAH1B3Q15102 231 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 PDK2Q15119 407 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 NYAP1Q6ZVC0 841 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 RBFAQ8N0V3 343 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 PQLC3Q8N755 202 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 KDF1Q8NAX2 398 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 OR4C6Q8NH72 309 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 NUDCD1Q96RS6 583 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 MGME1Q9BQP7 344 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 ZNF670Q9BS34 389 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 PCDHGA1Q9Y5H4 931 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 ASXL3Q9C0F0 2248 aa16.9■□□□□ 0.3
CSNK1D-205ENST00000403276 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 SCAMP1O15126 338 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 PCCBP05166 539 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 NME1P15531 152 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 MAN1A1P33908 653 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 HSPA9P38646 679 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 GARSP41250 739 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 YPEL5P62699 121 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 POLR2LP62875 67 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 GBE1Q04446 702 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 ITKQ08881 620 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 GALNT2Q10471 571 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 SLC10A2Q12908 348 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 TRAF2Q12933 501 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 INPP5AQ14642 412 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 SMAD1Q15797 465 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 LIPIQ6XZB0 460 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 MAP7D3Q8IWC1 876 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 BBS5Q8N3I7 341 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 GALNT15Q8N3T1 639 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 PLA2G15Q8NCC3 412 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 ZNF548Q8NEK5 533 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 LMX1AQ8TE12 382 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 ZCCHC14Q8WYQ9 949 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 FAF2Q96CS3 445 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 PDLIM2Q96JY6 352 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 HYOU1Q9Y4L1 999 aa16.89■□□□□ 0.29
CSNK1D-205ENST00000403276 GOLGA6L6A8MZA4 724 aa16.88■□□□□ 0.29
CSNK1D-205ENST00000403276 H3BM21 787 aa16.88■□□□□ 0.29
CSNK1D-205ENST00000403276 K7ESM1 405 aa16.88■□□□□ 0.29
CSNK1D-205ENST00000403276 HTRA2O43464 458 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-205ENST00000403276 RECQL5O94762 991 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-205ENST00000403276 C1SP09871 688 aa16.88■□□□□ 0.29
CSNK1D-205ENST00000403276 TNNT1P13805 278 aa16.88■□□□□ 0.29
CSNK1D-205ENST00000403276 GM2AP17900 193 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms