RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 H7C2Y5 167 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 PRMT5O14744 637 aaPredicted RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 PMM2O15305 246 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 TRAPPC2P0DI81 140 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 TRAPPC2BP0DI82 140 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 YAP1P46937 504 aaKnown RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 VBP1P61758 197 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 PLCL1Q15111 1095 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 PLA2G4EQ3MJ16 856 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ALFQ53S48 1182 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 SMYD5Q6GMV2 418 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 HMBOX1Q6NT76 420 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 ARMCX2Q7L311 632 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 VANGL1Q8TAA9 524 aaPredicted RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 MASTLQ96GX5 879 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 TRIM62Q9BVG3 475 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 TRIM54Q9BYV2 358 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 RANBP3Q9H6Z4 567 aaPredicted RBP10.03□□□□□ -0.8
PTPRM-203ENST00000400060 LIMD1Q9UGP4 676 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 STON1Q9Y6Q2 735 aa10.03□□□□□ -0.8
PTPRM-203ENST00000400060 WDR27A2RRH5 827 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 SUPT7LO94864 414 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 CST1P01037 141 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 IFNA14P01570 189 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 CARTPTQ16568 116 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 COLEC12Q5KU26 742 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF781Q8N8C0 355 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 CENPIQ92674 756 aaPredicted RBP10.02□□□□□ -0.8
PTPRM-203ENST00000400060 DCSTAMPQ9H295 470 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 RPS6KA6Q9UK32 745 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 VAV3Q9UKW4 847 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 VPS9D1Q9Y2B5 631 aa10.02□□□□□ -0.8
PTPRM-203ENST00000400060 TCRBV7S2A1N4TA0A589 114 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 BHMG1C9JSJ3 638 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 TK2O00142 265 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 CNPP09543 421 aaKnown RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 BMP2P12643 396 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 TCF4P15884 667 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 FUT4P22083 530 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 RORAP35398 523 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 PPP2R2BQ00005 443 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 CYP24A1Q07973 514 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 HACD2Q6Y1H2 254 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 PHC2Q8IXK0 858 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 TRPV1Q8NER1 839 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 FAM120BQ96EK7 910 aaKnown RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 ITPAQ9BY32 194 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 RACGAP1Q9H0H5 632 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 C2orf40Q9H1Z8 148 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 TMEM216Q9P0N5 145 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 UBQLN2Q9UHD9 624 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 AAR2Q9Y312 384 aaKnown RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 FOXO6A8MYZ6 492 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 MYL12BO14950 172 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 KCNH1O95259 989 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 HOXA13P31271 388 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 ALDH7A1P49419 539 aaKnown RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 CDC42P60953 191 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 SMTNL2Q2TAL5 461 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 LSM12Q3MHD2 195 aaKnown RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 SCARA5Q6ZMJ2 495 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 ZBTB46Q86UZ6 589 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 RNF135Q8IUD6 432 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 ULK4Q96C45 1275 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 ACE2Q9BYF1 805 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 POMKQ9H5K3 350 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 TM9SF3Q9HD45 589 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 SIX2Q9NPC8 291 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 STOX2Q9P2F5 926 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 TBX20Q9UMR3 447 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 GH2P01242 217 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 BMP1P13497 986 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 AKAP5P24588 427 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 ATP4BP51164 291 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 SNAP25P60880 206 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 KCNA1Q09470 495 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 GRSF1Q12849 480 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 FNBP1LQ5T0N5 605 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 IRAK1BP1Q5VVH5 260 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 KCNMB4Q86W47 210 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 CAMKK1Q8N5S9 505 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 PHF10Q8WUB8 498 aaKnown RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 SLC35B4Q969S0 331 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 ZNF285Q96NJ3 590 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 EBF4Q9BQW3 602 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 DNAJC11Q9NVH1 559 aa10.02□□□□□ -0.81
PTPRM-203ENST00000400060 PAQR5Q9NXK6 330 aaPredicted RBP10.02□□□□□ -0.81
PTPRM-203ENST00000400060 MPZL2O60487 215 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 FADS2O95864 444 aaKnown RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 FUCA1P04066 466 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 PGRP06401 933 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 PEPDP12955 493 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 EPHA3P29320 983 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 ACADSBP45954 432 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 ALDH3A2P51648 485 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 EEFSECP57772 596 aaKnown RBP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.01□□□□□ -0.81
PTPRM-203ENST00000400060 AGAP6Q5VW22 663 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 TMEM199Q8N511 208 aa10.01□□□□□ -0.81
PTPRM-203ENST00000400060 ASZ1Q8WWH4 475 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms