RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TRAF2Q12933 501 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 C1QTNF12Q5T7M4 302 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 ESRP1Q6NXG1 681 aaKnown RBP14.07□□□□□ -0.16
APOB-202ENST00000399256 FBXO16Q8IX29 292 aaPredicted RBP14.07□□□□□ -0.16
APOB-202ENST00000399256 SPATA22Q8NHS9 363 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 SNTG2Q9NY99 539 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 SLC2A6Q9UGQ3 507 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 ERI2A8K979 691 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 TSPAN1O60635 241 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 DAB1O75553 588 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 INHBBP09529 407 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 CYP2C9P11712 490 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 INSRRP14616 1297 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 SLC1A2P43004 574 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 YBX1P67809 324 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 CAPRIN1Q14444 709 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 INTS11Q5TA45 600 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 ANKRD26P1Q6NSI1 321 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 C8orf82Q6P1X6 216 aaPredicted RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 DLK2Q6UY11 383 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 CMTR2Q8IYT2 770 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 SIX6OS1Q8N1H7 587 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 RPL10LQ96L21 214 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 KIFC1Q9BW19 673 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 SNX25Q9H3E2 840 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 SMARCAD1Q9H4L7 1026 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 FAM124BQ9H5Z6 455 aaPredicted RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 TRNAU1APQ9NX07 287 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 WDR37Q9Y2I8 494 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 A8MT66 165 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 I6L893 689 aaPredicted RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 CLDN5O00501 218 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 EI24O14681 340 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 AURKAO14965 403 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 ZNF12P17014 697 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 GNL1P36915 607 aaPredicted RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 BMXP51813 675 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 SLC12A2P55011 1212 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 PLCL1Q15111 1095 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 PDZD4Q76G19 769 aaPredicted RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 UNC93AQ86WB7 457 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 ERO1BQ86YB8 467 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 FUNDC1Q8IVP5 155 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 AFAP1L2Q8N4X5 818 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 PACRGLQ8N7B6 248 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 PNPLA1Q8N8W4 532 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 ZNF420Q8TAQ5 688 aaPredicted RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 NPY6RQ99463 290 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 GPATCH1Q9BRR8 931 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 NFKBIZQ9BYH8 718 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 AGPAT4Q9NRZ5 378 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 GIMAP2Q9UG22 337 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 MTF2Q9Y483 593 aaPredicted RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 FADS3Q9Y5Q0 445 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 CORINQ9Y5Q5 1042 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 ADM5C9JUS6 153 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 ADAM23O75077 832 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 FASP25445 335 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 GRM5P41594 1212 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 GNA12Q03113 381 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 TNK2Q07912 1038 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 UGP2Q16851 508 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 KIF19Q2TAC6 998 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 NAPEPLDQ6IQ20 393 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 USP50Q70EL3 339 aaPredicted RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 FAM35AQ86V20 835 aa14.06□□□□□ -0.16
APOB-202ENST00000399256 ZC3H7AQ8IWR0 971 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 DQX1Q8TE96 717 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
APOB-202ENST00000399256 SHROOM3Q8TF72 1996 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 CITO14578 2027 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 BEST1O76090 585 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 MT-CYBP00156 380 aaPredicted RBP14.05□□□□□ -0.16
APOB-202ENST00000399256 IL10P22301 178 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 PSMA4P25789 261 aaKnown RBP14.05□□□□□ -0.16
APOB-202ENST00000399256 DNAJB13P59910 316 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 INPP5AQ14642 412 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 NR1D2Q14995 579 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 ATP6AP1Q15904 470 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 RBM20Q5T481 1227 aaKnown RBP14.05□□□□□ -0.16
APOB-202ENST00000399256 DCLRE1AQ6PJP8 1040 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 ABRAXAS1Q6UWZ7 409 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 SLC15A4Q8N697 577 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 SEPT8Q92599 483 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 WNT8BQ93098 351 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 ERLEC1Q96DZ1 483 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 KLRG1Q96E93 195 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 FAR2Q96K12 515 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 DOK1Q99704 481 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 C9orf16Q9BUW7 83 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 EML4Q9HC35 981 aaKnown RBP14.05□□□□□ -0.16
APOB-202ENST00000399256 IGSF5Q9NSI5 407 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 GJD2Q9UKL4 321 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 PAPPA2Q9BXP8 1791 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 ALDOCP09972 364 aaKnown RBP14.05□□□□□ -0.16
APOB-202ENST00000399256 ADRA1BP35368 520 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 RPL34P49207 117 aaKnown RBP14.05□□□□□ -0.16
APOB-202ENST00000399256 ACADVLP49748 655 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms