RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 BEND5Q7L4P6 421 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 CUZD1Q86UP6 607 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 FCRL2Q96LA5 508 aaPredicted RBP25.74■■□□□ 1.71
COL13A1-203ENST00000398969 TRIM62Q9BVG3 475 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 EML4Q9HC35 981 aaKnown RBP25.74■■□□□ 1.71
COL13A1-203ENST00000398969 MRGBPQ9NV56 204 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 NYNRINQ9P2P1 1898 aaKnown RBP25.74■■□□□ 1.71
COL13A1-203ENST00000398969 FBP2O00757 339 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 VILLO15195 856 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 PRKCZQ05513 592 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 FASTKQ14296 549 aaKnown RBP25.74■■□□□ 1.71
COL13A1-203ENST00000398969 MAPRE2Q15555 327 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 AGAP9Q5VTM2 703 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 REP15Q6BDI9 236 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 RBM44Q6ZP01 1051 aaKnown RBP25.74■■□□□ 1.71
COL13A1-203ENST00000398969 RPS27LQ71UM5 84 aaKnown RBP25.74■■□□□ 1.71
COL13A1-203ENST00000398969 AFAP1L2Q8N4X5 818 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 ZFRQ96KR1 1074 aaKnown RBP25.74■■□□□ 1.71
COL13A1-203ENST00000398969 ACBD6Q9BR61 282 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 UPF3AQ9H1J1 476 aaKnown RBP25.74■■□□□ 1.71
COL13A1-203ENST00000398969 SARDHQ9UL12 918 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 ST3GAL5Q9UNP4 418 aa25.74■■□□□ 1.71
COL13A1-203ENST00000398969 SCN10AQ9Y5Y9 1956 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 PSMD12O00232 456 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-203ENST00000398969 UBDO15205 165 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 MSI1O43347 362 aaKnown RBP25.73■■□□□ 1.71
COL13A1-203ENST00000398969 C8BP07358 591 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 FAM58BPP0C7Q3 252 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 ODC1P11926 461 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 TRIM32Q13049 653 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 PCSK7Q16549 785 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 PPP1R3AQ16821 1122 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 NADK2Q4G0N4 442 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 AFMIDQ63HM1 303 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 PCDHAC1Q9H158 963 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 MRPL40Q9NQ50 206 aaKnown RBP25.73■■□□□ 1.71
COL13A1-203ENST00000398969 TBC1D13Q9NVG8 400 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 SFMBT1Q9UHJ3 866 aa25.73■■□□□ 1.71
COL13A1-203ENST00000398969 SEPT4O43236 478 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 LTA4HP09960 611 aaKnown RBP25.72■■□□□ 1.71
COL13A1-203ENST00000398969 SPATA31D3P0C874 917 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 ZNF26P17031 533 aaPredicted RBP25.72■■□□□ 1.71
COL13A1-203ENST00000398969 RPL9P32969 192 aaKnown RBP25.72■■□□□ 1.71
COL13A1-203ENST00000398969 WNT3AP56704 352 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 USP41Q3LFD5 358 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 ARMC3Q5W041 872 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 SPATA31D4Q6ZUB0 917 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 TOP1MTQ969P6 601 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 SLC2A11Q9BYW1 496 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 SPC25Q9HBM1 224 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 TRIM24O15164 1050 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 CCDC166P0CW27 439 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 HDCP19113 662 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 CCR1P32246 355 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 LEPRP48357 1165 aaKnown RBP25.72■■□□□ 1.71
COL13A1-203ENST00000398969 PLK1P53350 603 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 MRPS6P82932 125 aaKnown RBP25.72■■□□□ 1.71
COL13A1-203ENST00000398969 BIRC2Q13490 618 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 MGAT5BQ3V5L5 792 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 PAN2Q504Q3 1202 aaKnown RBP25.72■■□□□ 1.71
COL13A1-203ENST00000398969 AGKQ53H12 422 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 IYDQ6PHW0 289 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 PRPF18Q99633 342 aaKnown RBP25.72■■□□□ 1.71
COL13A1-203ENST00000398969 PKMYT1Q99640 499 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 CCDC167Q9P0B6 97 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 AP4S1Q9Y587 144 aa25.72■■□□□ 1.71
COL13A1-203ENST00000398969 CLCN5P51795 746 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 CREB5Q02930 508 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.71■■□□□ 1.71
COL13A1-203ENST00000398969 KLC3Q6P597 504 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 PAOXQ6QHF9 649 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 KDELC1Q6UW63 502 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 AGMOQ6ZNB7 445 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 GRIP2Q9C0E4 1043 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 SMOC2Q9H3U7 446 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 GPBP1L1Q9HC44 474 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-203ENST00000398969 MYOCOSA0A1B0GUC4 107 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 HEATR9A2RTY3 570 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 RBP1P09455 135 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 ATP6V1B1P15313 513 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 PGFP49763 221 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 INHBCP55103 352 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 CAP1Q01518 475 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 CACNB2Q08289 660 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-203ENST00000398969 APOFQ13790 326 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 EML3Q32P44 896 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 GDF6Q6KF10 455 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-203ENST00000398969 CALML6Q8TD86 181 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 CASP10Q92851 521 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 EME1Q96AY2 570 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 TMEM209Q96SK2 561 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 ABCC13Q9NSE7 274 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 PTTG2Q9NZH5 202 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 MPP6Q9NZW5 540 aa25.71■■□□□ 1.71
COL13A1-203ENST00000398969 RHDQ02161 417 aa25.7■■□□□ 1.7
COL13A1-203ENST00000398969 RALGDSQ12967 914 aa25.7■■□□□ 1.7
COL13A1-203ENST00000398969 SLC14A2Q15849 920 aa25.7■■□□□ 1.7
COL13A1-203ENST00000398969 LRRTM3Q86VH5 581 aa25.7■■□□□ 1.7
COL13A1-203ENST00000398969 RTL3Q8N8U3 475 aaKnown RBP25.7■■□□□ 1.7
COL13A1-203ENST00000398969 PHF21BQ96EK2 531 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms