RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ERFP50548 548 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 GNG2P59768 71 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 LMAN2Q12907 356 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 CLN3Q13286 438 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ZC2HC1CQ53FD0 456 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TMEM31Q5JXX7 168 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 DCAF12L1Q5VU92 463 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 CYP4F22Q6NT55 531 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF720Q7Z2F6 126 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 GLRX5Q86SX6 157 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ZSWIM9Q86XI8 627 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC13A5Q86YT5 568 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC9A9Q8IVB4 645 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 PRELID2Q8N945 189 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 RDH13Q8NBN7 331 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 SMG7Q92540 1137 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ALG3Q92685 438 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 DYDC2Q96IM9 177 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 NSMCE2Q96MF7 247 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ERVK-5Q9HDB9 667 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 HMX1Q9NP08 348 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 UVRAGQ9P2Y5 699 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 SUCOQ9UBS9 1254 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 VPS4AQ9UN37 437 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 PTPN22Q9Y2R2 807 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 FRMPD4Q14CM0 1322 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 FOCADQ5VW36 1801 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TMEM210A6NLX4 147 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 MAP3K13O43283 966 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 NOS1APO75052 506 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ADAM23O75077 832 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ADH1CP00326 375 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 DLDP09622 509 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TXNP10599 105 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 RALAP11233 206 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 BMP3P12645 472 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 COMTP21964 271 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 PKLRP30613 574 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TLX1P31314 330 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 RRM2P31350 389 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 CCR10P46092 362 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 EIF2B2P49770 351 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 CBX2Q14781 532 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF805Q5CZA5 627 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 GTF2IRD2BQ6EKJ0 949 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ANO7Q6IWH7 933 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ARMC6Q6NXE6 501 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ZDHHC24Q6UX98 284 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 Q6ZNX1 250 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 C1orf186Q6ZWK4 172 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 GTF2IRD2Q86UP8 949 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF564Q8TBZ8 553 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 POMGNT1Q8WZA1 660 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 EME1Q96AY2 570 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 CRAMP1Q96RY5 1269 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 CYTH2Q99418 400 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ATP6V0BQ99437 205 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 SYT15Q9BQS2 421 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 MRPL37Q9BZE1 423 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 REXO4Q9GZR2 422 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 AAASQ9NRG9 546 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 WHRNQ9P202 907 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC12A4Q9UP95 1085 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ARL2BPQ9Y2Y0 163 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 IGSF9BQ9UPX0 1349 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 F5H6K3 240 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SNX3O60493 162 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CALB1P05937 261 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SERPINF2P08697 491 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ITIH2P19823 946 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CCND1P24385 295 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RFC2P35250 354 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PPM1AP35813 382 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PTGIRP43119 386 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RABIFP47224 123 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ERVK-21P61565 698 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 TRA2BP62995 288 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 AUHQ13825 339 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CCDC6Q16204 474 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CBWD6Q4V339 395 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CBWD3Q5JTY5 395 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CBWD5Q5RIA9 395 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RNF220Q5VTB9 566 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 AFMIDQ63HM1 303 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SPOPLQ6IQ16 392 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CDC42EP5Q6NZY7 148 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RNF207Q6ZRF8 634 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RETREG3Q86VR2 466 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 LHFPL5Q8TAF8 219 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 LPGAT1Q92604 370 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 MTFMTQ96DP5 389 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RAB3IPQ96QF0 476 aaPredicted RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ACCSQ96QU6 501 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 BBS4Q96RK4 519 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM105AQ9NUU6 356 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PARVAQ9NVD7 372 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 GRHL1Q9NZI5 618 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 POLLQ9UGP5 575 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ARHGAP26Q9UNA1 814 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SMG5Q9UPR3 1016 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms