RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TSC22D4Q9Y3Q8 395 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 OR51B4Q9Y5P0 310 aa5.9□□□□□ -1.46
PTPRD-206ENST00000397617 GVINP1Q7Z2Y8 2422 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 NINQ8N4C6 2090 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 CASTOR2A6NHX0 329 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 MATN4O95460 622 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 CALCAP01258 141 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ZSCAN5DPP0CG00 497 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 NQO1P15559 274 aaKnown RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 SFSWAPQ12872 951 aaKnown RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 PDE1CQ14123 709 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 E2F2Q14209 437 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 SLC39A12Q504Y0 691 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 CASC4Q6P4E1 433 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 DNAAF5Q86Y56 855 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 NATD1Q8N6N6 113 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF513Q8N8E2 541 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF764Q96H86 408 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 DERL2Q9GZP9 239 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 TASP1Q9H6P5 420 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 RDH14Q9HBH5 336 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 MRPL17Q9NRX2 175 aaKnown RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ANKRD36A6QL64 1941 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 TM7SF2O76062 418 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 BEST1O76090 585 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 LTA4HP09960 611 aaKnown RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ARFIP1P53367 373 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ABRQ12979 859 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 FASTKD3Q14CZ7 662 aaKnown RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ARTNQ5T4W7 220 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 DLK2Q6UY11 383 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 HFE2Q6ZVN8 426 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 STRA8Q7Z7C7 330 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 SCN4BQ8IWT1 228 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 STARD8Q92502 1023 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ROPN1LQ96C74 230 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ECHDC3Q96DC8 303 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ERP27Q96DN0 273 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 DUS3LQ96G46 650 aaKnown RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ASIC5Q9NY37 505 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 GDE1Q9NZC3 331 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 IL17CQ9P0M4 197 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 PRG3Q9Y2Y8 225 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF451Q9Y4E5 1061 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 MEIS3P2A8K0S8 358 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 H3BNC9 293 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 IL1RNP18510 177 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 TXNL4AP83876 142 aaKnown RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 FASTKD1Q53R41 847 aaKnown RBP5.9□□□□□ -1.47
PTPRD-206ENST00000397617 WLSQ5T9L3 541 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 Q6ZNB5 142 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 NUDT18Q6ZVK8 323 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 NECAB2Q7Z6G3 386 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 FAM84AQ96KN4 292 aa5.9□□□□□ -1.47
PTPRD-206ENST00000397617 SERTM1A2A2V5 107 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 UGDHO60701 494 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF37AP17032 561 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF7P17097 686 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CD68P34810 354 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 RPL14P50914 215 aaKnown RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CTBSQ01459 385 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 RCN2Q14257 317 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TRIP13Q15645 432 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CNGA3Q16281 694 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CTC1Q2NKJ3 1217 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 FNBP1LQ5T0N5 605 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SLC7A6OSQ96CW6 309 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 EBF2Q9HAK2 575 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TRPV4Q9HBA0 871 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ABI2Q9NYB9 513 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TAGLN3Q9UI15 199 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 INSL5Q9Y5Q6 135 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SLC38A8A6NNN8 435 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SLC16A5O15375 505 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TIMP1P01033 207 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 HSD3B1P14060 373 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TFEBP19484 476 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 HSD3B2P26439 372 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ABCE1P61221 599 aaKnown RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 KCNC3Q14003 757 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 RASIP1Q5U651 963 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SEL1L3Q68CR1 1132 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 PRPF39Q86UA1 669 aaKnown RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 CD99L2Q8TCZ2 262 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 BTBD9Q96Q07 612 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ZCCHC2Q9C0B9 1178 aaKnown RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 KIAA1522Q9P206 1035 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 H0Y858 1186 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ACADSP16219 412 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SERPINA4P29622 427 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 OR1E1P30953 314 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SP140Q13342 867 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 TAF12Q16514 161 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 SLC39A5Q6ZMH5 540 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 BNC2Q6ZN30 1099 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ARID3BQ8IVW6 561 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-206ENST00000397617 RBFAQ8N0V3 343 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 ELMOD1Q8N336 334 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 UBTD2Q8WUN7 234 aa5.89□□□□□ -1.47
PTPRD-206ENST00000397617 KLF16Q9BXK1 252 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms