RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SPAM1P38567 509 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 LIG3P49916 1009 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SERINC3Q13530 473 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ATXN7L2Q5T6C5 722 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 FAM151BQ6UXP7 276 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 KYAT3Q6YP21 454 aaKnown RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 C14orf80Q86SX3 495 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ZNF398Q8TD17 642 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 BRSK1Q8TDC3 778 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 LINC01599Q8WXQ3 324 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 KLHL32Q96NJ5 620 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SLC2A11Q9BYW1 496 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ZBP1Q9H171 429 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 NPHS2Q9NP85 383 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 PCDHGB4Q9UN71 923 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ACTL7BQ9Y614 415 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 USH1CQ9Y6N9 552 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 TMEM247A6NEH6 219 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 C2orf71A6NGG8 1288 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SNAP91O60641 907 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 PRAMEF11O60813 436 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 CTSEP14091 401 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 KCNA5P22460 613 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 TPD52P55327 224 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SEC13P55735 322 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 PLCL1Q15111 1095 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SHHQ15465 462 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 OASLQ15646 514 aaKnown RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 DBN1Q16643 649 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 CENPIQ92674 756 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 TSGA13Q96PP4 275 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 OSBPL1AQ9BXW6 950 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 KDM4CQ9H3R0 1056 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 LRRC4CQ9HCJ2 640 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 CYP4F12Q9HCS2 524 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 CHRAC1Q9NRG0 131 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 AASDHPPTQ9NRN7 309 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 GDE1Q9NZC3 331 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 CDYLQ9Y232 598 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 MTO1Q9Y2Z2 717 aaKnown RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 HCFC2Q9Y5Z7 792 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 PSME4Q14997 1843 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 LRRC72A6NJI9 287 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 J3KR12 359 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 BTN3A1O00481 513 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SEC24AO95486 1093 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ANP32DO95626 131 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 HLA-DQB2P05538 268 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 MZF1P28698 734 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 GRK3P35626 688 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ATXN3P54252 364 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 UBXN2BQ14CS0 331 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 TERF2Q15554 542 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 PLEKHG6Q3KR16 790 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ALFQ53S48 1182 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 FBXO39Q8N4B4 442 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SPPL3Q8TCT6 385 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 TCP10LQ8TDR4 215 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ELMO1Q92556 727 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SERAC1Q96JX3 654 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 MAGEB18Q96M61 343 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 FAM126AQ9BYI3 521 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 FAM83DQ9H4H8 585 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 ACTR5Q9H9F9 607 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 PHPT1Q9NRX4 125 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 NDE1Q9NXR1 346 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 USP15Q9Y4E8 981 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 GREB1LQ9C091 1923 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-204ENST00000397606 SMCHD1A6NHR9 2005 aa8.32□□□□□ -1.08
PTPRD-204ENST00000397606 HEPACAM2A8MVW5 462 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 SLCO1B7G3V0H7 640 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CFLARO15519 480 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 ADAM12O43184 909 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 METTL18O95568 372 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 HSPA14Q0VDF9 509 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 EFTUD2Q15029 972 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PITRM1Q5JRX3 1037 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 KIAA0319Q5VV43 1072 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 ANKRD22Q5VYY1 191 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 KIAA0408Q6ZU52 694 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PAQR9Q6ZVX9 377 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 FAM124AQ86V42 546 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 OR14C36Q8NHC7 312 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 STAG3L4Q8TBR4 150 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 AZIN2Q96A70 460 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 CCT8L2Q96SF2 557 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 RHOJQ9H4E5 214 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 SUV39H2Q9H5I1 410 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 SOX13Q9UN79 622 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 EDDM13A0A1B0GTR0 161 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 ZNF839A8K0R7 811 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PRMT5O14744 637 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PHGDHO43175 533 aaKnown RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 ZW10O43264 779 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 TRIM13O60858 407 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 ITGA2BP08514 1039 aa8.31□□□□□ -1.08
PTPRD-204ENST00000397606 DLDP09622 509 aaKnown RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 LTA4HP09960 611 aaKnown RBP8.31□□□□□ -1.08
PTPRD-204ENST00000397606 PSMC3P17980 439 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms