RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TMEM196Q5HYL7 178 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 PCID2Q5JVF3 399 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 C9orf64Q5T6V5 341 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 GDPD4Q6W3E5 623 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 UNC5BQ8IZJ1 945 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 TUBGCP5Q96RT8 1024 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 CPEB1Q9BZB8 566 aaKnown RBP21.32■■□□□ 1
CPNE1-204ENST00000397443 NDRG2Q9UN36 371 aaKnown RBP21.32■■□□□ 1
CPNE1-204ENST00000397443 STARD13Q9Y3M8 1113 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 SPO11Q9Y5K1 396 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 A8MX80 341 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 MAP2K7O14733 419 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 HTRA2O43464 458 aaPredicted RBP21.31■■□□□ 1
CPNE1-204ENST00000397443 FZD6O60353 706 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 NMBRP28336 390 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 KIR2DL1P43626 348 aaPredicted RBP21.31■■□□□ 1
CPNE1-204ENST00000397443 CACUL1Q86Y37 369 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 IQCKQ8N0W5 287 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 KDM1BQ8NB78 822 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 FBF1Q8TES7 1133 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 FCRL3Q96P31 734 aaPredicted RBP21.31■■□□□ 1
CPNE1-204ENST00000397443 PPANQ9NQ55 473 aaKnown RBP21.31■■□□□ 1
CPNE1-204ENST00000397443 SLC2A4RGQ9NR83 387 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 KCTD3Q9Y597 815 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 ARL5AQ9Y689 179 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 POLBP06746 335 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 PHBP35232 272 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 CRYMQ14894 314 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 EFTUD2Q15029 972 aaKnown RBP eCLIP21.31■■□□□ 16e-8■■■■□ 26.4
CPNE1-204ENST00000397443 SPDYCQ5MJ68 293 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 TRMT10BQ6PF06 316 aaKnown RBP21.31■■□□□ 1
CPNE1-204ENST00000397443 PLPP6Q8IY26 295 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 PIH1D2Q8WWB5 315 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 FAM3CQ92520 227 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 RUFY1Q96T51 708 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 SLC2A6Q9UGQ3 507 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 SOX13Q9UN79 622 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 DUSP12Q9UNI6 340 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 TCAF1Q9Y4C2 921 aa21.31■■□□□ 1
CPNE1-204ENST00000397443 A0A087WUV0 522 aaPredicted RBP21.3■■□□□ 1
CPNE1-204ENST00000397443 TCRBV9S1A1TA0A576 114 aa21.3■■□□□ 1
CPNE1-204ENST00000397443 AURKAO14965 403 aa21.3■■□□□ 1
CPNE1-204ENST00000397443 MSLNQ13421 630 aaPredicted RBP21.3■■□□□ 1
CPNE1-204ENST00000397443 PTPRCAPQ14761 206 aa21.3■■□□□ 1
CPNE1-204ENST00000397443 PKN3Q6P5Z2 889 aa21.3■■□□□ 1
CPNE1-204ENST00000397443 MICALCLQ6ZW33 695 aa21.3■■□□□ 1
CPNE1-204ENST00000397443 OR8D1Q8WZ84 308 aa21.3■■□□□ 1
CPNE1-204ENST00000397443 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.3■■□□□ 12e-16■■■■□ 24.6
CPNE1-204ENST00000397443 SARDHQ9UL12 918 aa21.3■■□□□ 1
CPNE1-204ENST00000397443 KPNA3O00505 521 aaPredicted RBP21.29■■□□□ 1
CPNE1-204ENST00000397443 ALADP13716 330 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 HNRNPLP14866 589 aaKnown RBP eCLIP21.29■■□□□ 12e-8■□□□□ 10.1
CPNE1-204ENST00000397443 DRD1P21728 446 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 ADRA1DP25100 572 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 SLCO1A2P46721 670 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 METAP1P53582 386 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 CBLBQ13191 982 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 GRM3Q14832 879 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 ANKRD20A4Q4UJ75 823 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 GSDMBQ8TAX9 411 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 ZNF641Q96N77 438 aaPredicted RBP21.29■■□□□ 1
CPNE1-204ENST00000397443 NAT9Q9BTE0 207 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 KIFC1Q9BW19 673 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 PRSS16Q9NQE7 514 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 FAM237BA0A1B0GVD1 139 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 MAGEB16A2A368 324 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 HEATR9A2RTY3 570 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 SHISA7A6NL88 538 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 CCL22O00626 93 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 IL1BP01584 269 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 TMPRSS15P98073 1019 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 ELAVL3Q14576 367 aaKnown RBP21.29■■□□□ 1
CPNE1-204ENST00000397443 LONRF1Q17RB8 773 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 CEP85LQ5SZL2 805 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 ALS2CLQ60I27 953 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 ESRP1Q6NXG1 681 aaKnown RBP21.29■■□□□ 1
CPNE1-204ENST00000397443 GLT6D1Q7Z4J2 308 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 MDGA1Q8NFP4 955 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 PRKAG3Q9UGI9 489 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 SUN2Q9UH99 717 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 NFS1Q9Y697 457 aa21.29■■□□□ 1
CPNE1-204ENST00000397443 TLDC2A0PJX2 215 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 GOLGA8KD6RF30 607 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 POC1B-GALNT4F8VUJ3 575 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 GOLGA8TH3BQL2 631 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 RNF40O75150 1001 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 KLF8O95600 359 aaPredicted RBP21.28■■□□□ 1
CPNE1-204ENST00000397443 NUDT17P0C025 328 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 GRIA4P48058 902 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 MLF2Q15773 248 aaPredicted RBP21.28■■□□□ 1
CPNE1-204ENST00000397443 TMEM135Q86UB9 458 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 CCNJLQ8IV13 435 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 MMAAQ8IVH4 418 aaKnown RBP21.28■■□□□ 1
CPNE1-204ENST00000397443 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.28■■□□□ 1
CPNE1-204ENST00000397443 EPS8L3Q8TE67 593 aaKnown RBP21.28■■□□□ 1
CPNE1-204ENST00000397443 FAM129BQ96TA1 746 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 CENPHQ9H3R5 247 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 VIPAS39Q9H9C1 493 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 RABGEF1Q9UJ41 708 aa21.28■■□□□ 1
CPNE1-204ENST00000397443 SORCS3Q9UPU3 1222 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms