RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PTCD2Q8WV60 388 aaKnown RBP23.92■■□□□ 1.42
PABPN1-202ENST00000397276 NCSTNQ92542 709 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 NMD3Q96D46 503 aaKnown RBP23.92■■□□□ 1.42
PABPN1-202ENST00000397276 POMKQ9H5K3 350 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 TMEM248Q9NWD8 314 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 CLIC5Q9NZA1 410 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 WASH4PA8MWX3 477 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 INPPL1O15357 1258 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 PGM3O95394 542 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 NDST2P52849 883 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 TBL3Q12788 808 aaKnown RBP23.92■■□□□ 1.42
PABPN1-202ENST00000397276 PRKAA1Q13131 559 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 MSANTD2Q6P1R3 559 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 RSPO2Q6UXX9 243 aaPredicted RBP23.92■■□□□ 1.42
PABPN1-202ENST00000397276 PGBD5Q8N414 524 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 ATP6V0D2Q8N8Y2 350 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 CENPKQ9BS16 269 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 MRPL46Q9H2W6 279 aaKnown RBP23.92■■□□□ 1.42
PABPN1-202ENST00000397276 SUDS3Q9H7L9 328 aaPredicted RBP23.92■■□□□ 1.42
PABPN1-202ENST00000397276 CCSER2Q9H7U1 834 aa23.92■■□□□ 1.42
PABPN1-202ENST00000397276 TXNDC9O14530 226 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 ARSDP51689 593 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 NRG1Q02297 640 aaPredicted RBP23.91■■□□□ 1.42
PABPN1-202ENST00000397276 POLD3Q15054 466 aaPredicted RBP23.91■■□□□ 1.42
PABPN1-202ENST00000397276 LRRC49Q8IUZ0 686 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 OR13J1Q8NGT2 312 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 HDAC10Q969S8 669 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 BTN2A3PQ96KV6 586 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 MRM3Q9HC36 420 aaKnown RBP23.91■■□□□ 1.42
PABPN1-202ENST00000397276 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.91■■□□□ 1.42
PABPN1-202ENST00000397276 ARHGAP26Q9UNA1 814 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 ACTL7AQ9Y615 435 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 PIRTP0C851 137 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 COL6A2P12110 1019 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 OR1E1P30953 314 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 ACAD11Q709F0 780 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 PRKD2Q9BZL6 878 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 GPAMQ9HCL2 828 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 TBC1D30Q9Y2I9 924 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 KCNA5P22460 613 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 MED21Q13503 144 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 SH2D4BQ5SQS7 431 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 RNF19BQ6ZMZ0 732 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 SNX32Q86XE0 403 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 ST13P4Q8IZP2 240 aaPredicted RBP23.91■■□□□ 1.42
PABPN1-202ENST00000397276 GDPD5Q8WTR4 605 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 PHF21BQ96EK2 531 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 PPP1R2P1Q96PQ5 205 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 GTSE1Q9NYZ3 720 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 CRYL1Q9Y2S2 319 aa23.91■■□□□ 1.42
PABPN1-202ENST00000397276 RAMP2O60895 175 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 CCDC166P0CW27 439 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 PIK3R1P27986 724 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 NUDT2P50583 147 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 DUSP4Q13115 394 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 SIRPB2Q5JXA9 342 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 MAP3K21Q5TCX8 1036 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 FBXL19Q6PCT2 694 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 CCDC117Q8IWD4 279 aaPredicted RBP23.9■■□□□ 1.42
PABPN1-202ENST00000397276 ARHGAP18Q8N392 663 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 ACTRT2Q8TDY3 377 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 SQORQ9Y6N5 450 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 ARSAP15289 507 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 VCLP18206 1134 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 POU4F1Q01851 419 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 LSAMPQ13449 338 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 TRIM67Q6ZTA4 783 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 SH3RF2Q8TEC5 729 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 PCDHGB4Q9UN71 923 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 PCDHGB5Q9Y5G0 923 aa23.9■■□□□ 1.42
PABPN1-202ENST00000397276 FKBP6O75344 327 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 KCNQ1P51787 676 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 PRAMEP78395 509 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 FAM189BP81408 668 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 SP3Q02447 781 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 LRRC23Q53EV4 343 aaPredicted RBP23.89■■□□□ 1.42
PABPN1-202ENST00000397276 METTL21CQ5VZV1 264 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 NAT14Q8WUY8 206 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 SEMA3CQ99985 751 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 TLR8Q9NR97 1041 aaKnown RBP23.89■■□□□ 1.42
PABPN1-202ENST00000397276 IGSF5Q9NSI5 407 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 MARCH4Q9P2E8 410 aaPredicted RBP23.89■■□□□ 1.42
PABPN1-202ENST00000397276 CDYLQ9Y232 598 aa23.89■■□□□ 1.42
PABPN1-202ENST00000397276 TMEM189-UBE2V1I3L0A0 370 aa23.89■■□□□ 1.41
PABPN1-202ENST00000397276 AOC2O75106 756 aa23.89■■□□□ 1.41
PABPN1-202ENST00000397276 BLOC1S5Q8TDH9 187 aa23.89■■□□□ 1.41
PABPN1-202ENST00000397276 ANKRD49Q8WVL7 239 aa23.89■■□□□ 1.41
PABPN1-202ENST00000397276 DNAJC1Q96KC8 554 aaKnown RBP23.89■■□□□ 1.41
PABPN1-202ENST00000397276 MRPL57Q9BQC6 102 aaKnown RBP23.89■■□□□ 1.41
PABPN1-202ENST00000397276 ARNT2Q9HBZ2 717 aa23.89■■□□□ 1.41
PABPN1-202ENST00000397276 POMPQ9Y244 141 aa23.89■■□□□ 1.41
PABPN1-202ENST00000397276 SLC4A1P02730 911 aa23.88■■□□□ 1.41
PABPN1-202ENST00000397276 UQCRBP14927 111 aa23.88■■□□□ 1.41
PABPN1-202ENST00000397276 MSX2P35548 267 aaPredicted RBP23.88■■□□□ 1.41
PABPN1-202ENST00000397276 INHBCP55103 352 aa23.88■■□□□ 1.41
PABPN1-202ENST00000397276 TRIP10Q15642 601 aa23.88■■□□□ 1.41
PABPN1-202ENST00000397276 TRIP4Q15650 581 aaPredicted RBP23.88■■□□□ 1.41
PABPN1-202ENST00000397276 DBF4BQ8NFT6 615 aa23.88■■□□□ 1.41
PABPN1-202ENST00000397276 FAM81AQ8TBF8 368 aa23.88■■□□□ 1.41
PABPN1-202ENST00000397276 VCX3BQ9H321 246 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms