RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SH3BGRL2Q9UJC5 107 aa12.4□□□□□ -0.43
SMU1-201ENST00000397149 SAMD4AQ9UPU9 718 aaKnown RBP12.4□□□□□ -0.43
SMU1-201ENST00000397149 H3BSH0 61 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 CBX6O95503 412 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 AMHP03971 560 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 BDNFP23560 247 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 SOX10P56693 466 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 MYL6P60660 151 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 PPP3R1P63098 170 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 PDIA5Q14554 519 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 TKFCQ3LXA3 575 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 C9orf64Q5T6V5 341 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 ZNF549Q6P9A3 640 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 SNX33Q8WV41 574 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 EFHD2Q96C19 240 aaPredicted RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 FBXO6Q9NRD1 293 aaPredicted RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 ZNF70Q9UC06 446 aaPredicted RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 A0A087X0B3 334 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 SSU72P8A0A1W2PR75 194 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 GNB5O14775 395 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 CXCL8P10145 99 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 MXD1Q05195 221 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 NR1I3Q14994 352 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 MPZL3Q6UWV2 235 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 PAGE2Q7Z2X7 111 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 EIF1ADQ8N9N8 165 aaKnown RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 MYCBPAPQ8TBZ2 947 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 CDK5RAP1Q96SZ6 601 aaKnown RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 FDXACB1Q9BRP7 624 aaPredicted RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 ZNF700Q9H0M5 742 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 TMEM165Q9HC07 324 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 PRDM8Q9NQV8 689 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 ERVK-18Q9QC07 812 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 SERPINE1P05121 402 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 SSTR1P30872 391 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 SLC25A25Q6KCM7 469 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 HMBOX1Q6NT76 420 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 AKAP14Q86UN6 197 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 ADSSL1Q8N142 457 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 CLIP4Q8N3C7 705 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 SDR16C5Q8N3Y7 309 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 LPAR1Q92633 364 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 PANX1Q96RD7 426 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 RMI1Q9H9A7 625 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 A2MP01023 1474 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 TPST2O60704 377 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 NPR2P20594 1047 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 ZNF543Q08ER8 600 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 TOP3AQ13472 1001 aaPredicted RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 SLC22A15Q8IZD6 547 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 FSTL5Q8N475 847 aaPredicted RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 KBTBD8Q8NFY9 601 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 LMLNQ96KR4 655 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 C3orf18Q9UK00 162 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 NR2E1Q9Y466 385 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 GCATO75600 419 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 PIGNO95427 931 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 VNN2O95498 520 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 CHRM5P08912 532 aaPredicted RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 PIRTP0C851 137 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 GMPSP49915 693 aaPredicted RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 SF1Q15637 639 aaKnown RBP12.39□□□□□ -0.43
SMU1-201ENST00000397149 B3GNT6Q6ZMB0 384 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 FBXO44Q9H4M3 255 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 BRD7Q9NPI1 651 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 MSRAQ9UJ68 235 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 ASF1AQ9Y294 204 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 DGKBQ9Y6T7 804 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 BIVM-ERCC5R4GMW8 1640 aa12.39□□□□□ -0.43
SMU1-201ENST00000397149 ADSSP30520 456 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 NDUFV1P49821 464 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 ERVK-9P63128 1117 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 ZNF155Q12901 538 aaPredicted RBP12.38□□□□□ -0.43
SMU1-201ENST00000397149 LDLRAP1Q5SW96 308 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 TCEAL3Q969E4 200 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 METTL8Q9H825 291 aaKnown RBP12.38□□□□□ -0.43
SMU1-201ENST00000397149 PLCL2Q9UPR0 1127 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 ERVK-11Q9UQG0 969 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 ITGB1P05556 798 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 THRBP10828 461 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 MUTP22033 750 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 MMP13P45452 471 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 SLC15A2Q16348 729 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 RAD9BQ6WBX8 426 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 CENPSQ8N2Z9 138 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 B3GNT4Q9C0J1 378 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 MTMR4Q9NYA4 1195 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 GSG1L2A8MUP6 293 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 EPHB6O15197 1021 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 RRM1P23921 792 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 SLC6A2P23975 617 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 CPSF6Q16630 551 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMU1-201ENST00000397149 P4HA3Q7Z4N8 544 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 RELL1Q8IUW5 271 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 C1orf216Q8TAB5 229 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 CCDC28BQ9BUN5 200 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 497.5 ms