RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 GK5Q6ZS86 529 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 VASH1Q7L8A9 365 aaPredicted RBP11.87□□□□□ -0.51
FGFR1-208ENST00000397108 ZNF598Q86UK7 904 aaKnown RBP11.87□□□□□ -0.51
FGFR1-208ENST00000397108 CBR4Q8N4T8 237 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 NAT16Q8N8M0 369 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 NTPCRQ9BSD7 190 aaKnown RBP11.87□□□□□ -0.51
FGFR1-208ENST00000397108 FAM96AQ9H5X1 160 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 EFCAB1Q9HAE3 211 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 PAK5Q9P286 719 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 ARHGAP28Q9P2N2 729 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 CNOT11Q9UKZ1 510 aaKnown RBP11.87□□□□□ -0.51
FGFR1-208ENST00000397108 PCDHB12Q9Y5F1 795 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 SPO11Q9Y5K1 396 aa11.87□□□□□ -0.51
FGFR1-208ENST00000397108 KCNU1A8MYU2 1149 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 EIF3FO00303 357 aaPredicted RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PFDN6O15212 129 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 ARHGEF15O94989 841 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 EOMESO95936 686 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 NAT1P18440 290 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 SESN2P58004 480 aaPredicted RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 KCNC4Q03721 635 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 NOMO1Q15155 1222 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 DLG2Q15700 870 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PTPN20Q4JDL3 420 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 NOTUMQ6P988 496 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 Q7L0L9 218 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PCYOX1LQ8NBM8 494 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 TMEM174Q8WUU8 243 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 TFAP2CQ92754 450 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 CCDC68Q9H2F9 335 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 DHX35Q9H5Z1 703 aaKnown RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 FAM105AQ9NUU6 356 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 DCDC2Q9UHG0 476 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 CNOT6Q9ULM6 557 aaKnown RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 COL4A4P53420 1690 aaPredicted RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 A0A1W2PQ67 120 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 LINC01553A4QN01 128 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 B4GALT5O43286 388 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 ZNF623O75123 536 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 S100BP04271 92 aaPredicted RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PRKCBP05771 671 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 ARF4P18085 180 aaPredicted RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 TSPY1Q01534 308 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 TRPC3Q13507 836 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PLCL1Q15111 1095 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 CLPPQ16740 277 aaPredicted RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 UBXN11Q5T124 520 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 DENND1BQ6P3S1 775 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 ZNF534Q76KX8 674 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 CMTR2Q8IYT2 770 aaKnown RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PQLC3Q8N755 202 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 BPIFB6Q8NFQ5 453 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 SGF29Q96ES7 293 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PEBP4Q96S96 227 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 TMEM134Q9H6X4 195 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 CAB39LQ9H9S4 337 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
FGFR1-208ENST00000397108 USP18Q9UMW8 372 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 FIS1Q9Y3D6 152 aa11.86□□□□□ -0.51
FGFR1-208ENST00000397108 PSMD11O00231 422 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 HOXA2O43364 376 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 B4GAT1O43505 415 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 BCL10O95999 233 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CST3P01034 146 aaPredicted RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 C8BP07358 591 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 ERVK-10P10266 1014 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CD19P15391 556 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 DCKP27707 260 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 IDUAP35475 653 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TPTEP56180 551 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 PSME3P61289 254 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 IRF9Q00978 393 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 INAQ16352 499 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 PIWIL3Q7Z3Z3 882 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 DSG4Q86SJ6 1040 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CPB2Q96IY4 423 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 HGH1Q9BTY7 390 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CYTH4Q9UIA0 394 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 MAGED2Q9UNF1 606 aaPredicted RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 AURKCQ9UQB9 309 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CPQQ9Y646 472 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 ACKR2O00590 384 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TRIM38O00635 465 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 NOL3O60936 208 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 GMNNO75496 209 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 MYO1DO94832 1006 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TNK2Q07912 1038 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CAMK2BQ13554 666 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TIGD2Q4W5G0 525 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TIFABQ6ZNK6 161 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 NETO2Q8NC67 525 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CEP44Q9C0F1 390 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 POLE4Q9NR33 117 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 RNF19AQ9NV58 838 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 MTMR10Q9NXD2 777 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 AP4E1Q9UPM8 1137 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms