RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 OPA1O60313 960 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 MT-CO3P00414 261 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 CELA2BP08218 269 aaPredicted RBP18.43■□□□□ 0.54
FXN-203ENST00000396366 CD48P09326 243 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 IL4RP24394 825 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 SERPINA4P29622 427 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 ARL4AP40617 200 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 SLC25A11Q02978 314 aaKnown RBP18.43■□□□□ 0.54
FXN-203ENST00000396366 NSUN2Q08J23 767 aaKnown RBP eCLIP18.43■□□□□ 0.54
FXN-203ENST00000396366 RALGDSQ12967 914 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 MMRN1Q13201 1228 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 PTK2BQ14289 1009 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 INPP5AQ14642 412 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 LBRQ14739 615 aaKnown RBP18.43■□□□□ 0.54
FXN-203ENST00000396366 TCEA2Q15560 299 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 CDKN3Q16667 212 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 COL28A1Q2UY09 1125 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 FAXCQ5TGI0 409 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 ERAP2Q6P179 960 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 ALKBH5Q6P6C2 394 aaKnown RBP18.43■□□□□ 0.54
FXN-203ENST00000396366 BRAT1Q6PJG6 821 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 TMCO3Q6UWJ1 677 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 PHACTR4Q8IZ21 702 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 PGBD5Q8N414 524 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 LZTR1Q8N653 840 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 DCBLD1Q8N8Z6 715 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 PLA2G15Q8NCC3 412 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 TSACCQ96A04 125 aaPredicted RBP18.43■□□□□ 0.54
FXN-203ENST00000396366 ECHDC3Q96DC8 303 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 PSKH2Q96QS6 385 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 LRRC61Q9BV99 259 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 C1QTNF7Q9BXJ2 289 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 XPO4Q9C0E2 1151 aaKnown RBP18.43■□□□□ 0.54
FXN-203ENST00000396366 CLPBQ9H078 707 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 APOBEC3BQ9UH17 382 aaKnown RBP18.43■□□□□ 0.54
FXN-203ENST00000396366 IP6K2Q9UHH9 426 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 OR1A2Q9Y585 309 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 AK5Q9Y6K8 562 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 CSNK1G3Q9Y6M4 447 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 ASXL3Q9C0F0 2248 aa18.43■□□□□ 0.54
FXN-203ENST00000396366 TRAFD1O14545 582 aaPredicted RBP18.42■□□□□ 0.54
FXN-203ENST00000396366 CASC3O15234 703 aaKnown RBP18.42■□□□□ 0.54
FXN-203ENST00000396366 LZTS3O60299 673 aaPredicted RBP18.42■□□□□ 0.54
FXN-203ENST00000396366 MAFKO60675 156 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 ZNF135P52742 658 aaPredicted RBP18.42■□□□□ 0.54
FXN-203ENST00000396366 BCL2L1Q07817 233 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 RFTN1Q14699 578 aaPredicted RBP18.42■□□□□ 0.54
FXN-203ENST00000396366 ATP13A4Q4VNC1 1196 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 KCTD16Q68DU8 428 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 ZCCHC8Q6NZY4 707 aaKnown RBP18.42■□□□□ 0.54
FXN-203ENST00000396366 MACC1Q6ZN28 852 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 NIPA2Q8N8Q9 360 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 IFI44Q8TCB0 444 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 NXPE2Q96DL1 559 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 APOOQ9BUR5 198 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 DUSP23Q9BVJ7 150 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 SPASTQ9UBP0 616 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 SEPT3Q9UH03 358 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 NENFQ9UMX5 172 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 PCDHB1Q9Y5F3 818 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 PCDHGC4Q9Y5F7 938 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 SHROOM3Q8TF72 1996 aa18.42■□□□□ 0.54
FXN-203ENST00000396366 CPED1A4D0V7 1026 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 TLX3O43711 291 aaPredicted RBP18.41■□□□□ 0.54
FXN-203ENST00000396366 PCCBP05166 539 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 TSHRP16473 764 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 GM2AP17900 193 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 SSR1P43307 286 aaKnown RBP18.41■□□□□ 0.54
FXN-203ENST00000396366 PPARDQ03181 441 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 PTPRRQ15256 657 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 TMCO4Q5TGY1 634 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 CDCP2Q5VXM1 449 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 GUSBP11Q6P575 273 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 CRTC1Q6UUV9 634 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 RD3Q7Z3Z2 195 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 HID1Q8IV36 788 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 PAF1Q8N7H5 531 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 BTN2A2Q8WVV5 523 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 TEKT4Q8WW24 435 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 FUBP1Q96AE4 644 aaKnown RBP18.41■□□□□ 0.54
FXN-203ENST00000396366 CRELD1Q96HD1 420 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 ZNF599Q96NL3 588 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 DCBLD2Q96PD2 775 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 IL12RB2Q99665 862 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 PACSIN1Q9BY11 444 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 SLC13A1Q9BZW2 595 aa18.41■□□□□ 0.54
FXN-203ENST00000396366 YY2O15391 372 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 RECQL5O94762 991 aaPredicted RBP18.4■□□□□ 0.54
FXN-203ENST00000396366 HOXB3P14651 431 aaPredicted RBP18.4■□□□□ 0.54
FXN-203ENST00000396366 TGM2P21980 687 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 CDH6P55285 790 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 MAXP61244 160 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 KRT81Q14533 505 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 RTP5Q14D33 572 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 AGERQ15109 404 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 ALG11Q2TAA5 492 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 ENPP7Q6UWV6 458 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 LIPIQ6XZB0 460 aa18.4■□□□□ 0.54
FXN-203ENST00000396366 EFL1Q7Z2Z2 1120 aaKnown RBP18.4■□□□□ 0.54
FXN-203ENST00000396366 CACTIN-AS1Q8N1I8 211 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms