RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 DCUN1D1Q96GG9 259 aa16.1■□□□□ 0.17
CCHCR1-202ENST00000396263 FAR2Q96K12 515 aa16.1■□□□□ 0.17
CCHCR1-202ENST00000396263 MARK4Q96L34 752 aa16.1■□□□□ 0.17
CCHCR1-202ENST00000396263 UPF3AQ9H1J1 476 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-202ENST00000396263 FNIP2Q9P278 1114 aa16.1■□□□□ 0.17
CCHCR1-202ENST00000396263 SFMBT1Q9UHJ3 866 aa16.1■□□□□ 0.17
CCHCR1-202ENST00000396263 ZNF232Q9UNY5 417 aa16.1■□□□□ 0.17
CCHCR1-202ENST00000396263 CAPN8A6NHC0 703 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 WASH4PA8MWX3 477 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 E9PAM4 449 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 TNFRSF10BO14763 440 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 GPR182O15218 404 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 MSI1O43347 362 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 BCAS2O75934 225 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 OR6B1O95007 311 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 CHRNA4P43681 627 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 MRPS22P82650 360 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 MS4A2Q01362 244 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 PFKPQ01813 784 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 FAM83EQ2M2I3 478 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 RARS2Q5T160 578 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 CNSTQ6PJW8 725 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 KDELC1Q6UW63 502 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 CHSY3Q70JA7 882 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 MARVELD2Q8N4S9 558 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 CALML6Q8TD86 181 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 OSER1Q9NX31 292 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 UTP6Q9NYH9 597 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 RIMS3Q9UJD0 308 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 HEATR9A2RTY3 570 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 KCNU1A8MYU2 1149 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 CFLARO15519 480 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 KPNA6O60684 536 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 PFDN1O60925 122 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 ADAMTS4O75173 837 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 LEPRP48357 1165 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 CHN2P52757 468 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 PKNOX1P55347 436 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 WNT3AP56704 352 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 SULT2A1Q06520 285 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 MGAT3Q09327 533 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 SEPT6Q14141 434 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 RBM20Q5T481 1227 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 OVOS1Q6IE37 1185 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 GDF6Q6KF10 455 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 SCD5Q86SK9 330 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 TICAM1Q8IUC6 712 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 CATSPER1Q8NEC5 780 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 RSPH1Q8WYR4 309 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 DNAJC1Q96KC8 554 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 LRGUKQ96M69 825 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 RANBP9Q96S59 729 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 UNKQ9C0B0 810 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 SLC25A51Q9H1U9 297 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 ATXN3LQ9H3M9 355 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 ATP13A1Q9HD20 1204 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 SRRDQ9UH36 339 aa16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 IPO11Q9UI26 975 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-202ENST00000396263 AURKAO14965 403 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 POMCP01189 267 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 CAPNS1P04632 268 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 PABPC4LP0CB38 370 aaKnown RBP16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 PGFP49763 221 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 CLCN5P51795 746 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 TSPY1Q01534 308 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 CSHL1Q14406 222 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 SLC14A2Q15849 920 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 PSMD5Q16401 504 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 AGAP9Q5VTM2 703 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 GALNT7Q86SF2 657 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 THEM5Q8N1Q8 247 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 GABPB2Q8TAK5 448 aaPredicted RBP16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 USP13Q92995 863 aaPredicted RBP16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 NMD3Q96D46 503 aaKnown RBP16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 SGF29Q96ES7 293 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 GCNAQ96QF7 691 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 MTG1Q9BT17 334 aaPredicted RBP16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 GTSE1Q9NYZ3 720 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 HS3ST4Q9Y661 456 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 MYO16Q9Y6X6 1858 aa16.08■□□□□ 0.17
CCHCR1-202ENST00000396263 PRSS51A0A1B0GVH4 220 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 ACOT8O14734 319 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 PEX11BO96011 259 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 PSMD8P48556 350 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 C14orf80Q86SX3 495 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 SATL1Q86VE3 508 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 BHLHE22Q8NFJ8 381 aaPredicted RBP16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 ADCY4Q8NFM4 1077 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 FATE1Q969F0 183 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 MPP4Q96JB8 637 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 OLFM1Q99784 485 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 RAB26Q9ULW5 256 aa16.08■□□□□ 0.16
CCHCR1-202ENST00000396263 NEMP2A6NFY4 417 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 TXNDC9O14530 226 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 IPO13O94829 963 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 HNRNPLP14866 589 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 MLLT6P55198 1093 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 GALNT1Q10472 559 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 TLR1Q15399 786 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms