RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 PID1Q7Z2X4 250 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 TMIEQ8NEW7 156 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 RUBCNQ92622 972 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PPP1R16AQ96I34 528 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 MYCBPQ99417 103 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 TMEM121Q9BTD3 319 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 POLR1EQ9GZS1 481 aaKnown RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 ATP13A3Q9H7F0 1226 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 PARD6AQ9NPB6 346 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 AASDHPPTQ9NRN7 309 aa10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 KLHL8Q9P2G9 620 aaPredicted RBP10.2□□□□□ -0.78
THUMPD1-202ENST00000396083 FRYQ5TBA9 3013 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 A0A1W2PQU0 124 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 ANKRD65E5RJM6 399 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 KCNN4O15554 427 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 MMP20O60882 483 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 PMPCBO75439 489 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 RHOBTB1O94844 696 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 FGGP02679 453 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 ALPIP09923 528 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 RHOXF2BP0C7M4 288 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 SERPINA4P29622 427 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 MAPK8P45983 427 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 VSNL1P62760 191 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 TRAF2Q12933 501 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 OLIG2Q13516 323 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 TUBB2AQ13885 445 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 BYSLQ13895 437 aaKnown RBP10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 TAZQ16635 292 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 RHOXF2Q9BQY4 288 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 TUBB2BQ9BVA1 445 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 GTPBP2Q9BX10 602 aaKnown RBP10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 BRD8Q9H0E9 1235 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 ACBD3Q9H3P7 528 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 FBRSQ9HAH7 460 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 NCOR2Q9Y618 2525 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 LRRC72A6NJI9 287 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 ZNF185O15231 689 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 IFNB1P01574 187 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 IGHV4-34P06331 123 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 TGM2P21980 687 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 ITGB7P26010 798 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 CLDN2P57739 230 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 PPP2R5EQ16537 467 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 UGP2Q16851 508 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 FAXCQ5TGI0 409 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 SLC36A4Q6YBV0 504 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 USP30Q70CQ3 517 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 FAM71DQ8N9W8 422 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 CCDC110Q8TBZ0 833 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 CASKIN2Q8WXE0 1202 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 MGME1Q9BQP7 344 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 MED4Q9NPJ6 270 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 SEMA4GQ9NTN9 838 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 DNPEPQ9ULA0 475 aa10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 FNDC3AQ9Y2H6 1198 aaKnown RBP10.19□□□□□ -0.78
THUMPD1-202ENST00000396083 LRRK1Q38SD2 2015 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 PCNX2A6NKB5 2137 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 IGLON5A6NGN9 336 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 METTL12A8MUP2 240 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 ALOX15BO15296 676 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 RNGTTO60942 597 aaKnown RBP10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 PTPN3P26045 913 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 OXTRP30559 389 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 PLA2G5P39877 138 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 EPHB1P54762 984 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 GDF10P55107 478 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 GALNT3Q14435 633 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 NOMO1Q15155 1222 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 LAIR1Q6GTX8 287 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 METTL3Q86U44 580 aaKnown RBP10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 COG1Q8WTW3 980 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 HTR3CQ8WXA8 447 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 SERAC1Q96JX3 654 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 ZC3H10Q96K80 434 aaKnown RBP10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 CAPZA3Q96KX2 299 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 SLC6A18Q96N87 628 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 APOL2Q9BQE5 337 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 PCDH12Q9NPG4 1184 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 SCML1Q9UN30 329 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 RAI2Q9Y5P3 530 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 PLXND1Q9Y4D7 1925 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 KNTC1P50748 2209 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 PLXNA2O75051 1894 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 GOLGA6CA6NDK9 693 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 GOLGA6BA6NDN3 693 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 PLRG1O43660 514 aaKnown RBP10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 CPP00450 1065 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 GOLGA6DP0CG33 693 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 TIMP2P16035 220 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 NFKB1P19838 968 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 CR2P20023 1033 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 KCNA4P22459 653 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 KCNJ1P48048 391 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 NR2C2P49116 596 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 COPS2P61201 443 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 WASHC5Q12768 1159 aa10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 RFTN1Q14699 578 aaPredicted RBP10.18□□□□□ -0.78
THUMPD1-202ENST00000396083 ZNF567Q8N184 647 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms