RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 KCTD4Q8WVF5 259 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 PRCCQ92733 491 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 FCRL2Q96LA5 508 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 KCNK4Q9NYG8 393 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 CLIC5Q9NZA1 410 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 RPS6KA6Q9UK32 745 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 ITGAVP06756 1048 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 HGFP14210 728 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 ERCC2P18074 760 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SMARCB1Q12824 385 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 TRAF3Q13114 568 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 BRMS1LQ5PSV4 323 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 PPP1R15BQ5SWA1 713 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 EXOC3L1Q86VI1 746 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 PHYKPLQ8IUZ5 450 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 REXO5Q96IC2 774 aaKnown RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 LGMNQ99538 433 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 CERS4Q9HA82 394 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SUCOQ9UBS9 1254 aaKnown RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 DAPK2Q9UIK4 370 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 MYRFQ9Y2G1 1151 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 PCDHGC5Q9Y5F6 944 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 DYTNA2CJ06 578 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 BANF1O75531 89 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 NAA20P61599 178 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 GRM3Q14832 879 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 DUSP28Q4G0W2 176 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SCIMPQ6UWF3 145 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 GCNT7Q6ZNI0 430 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 RBFAQ8N0V3 343 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 OTCP00480 354 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SLURP2P0DP57 97 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 CDK18Q07002 472 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 ZSWIM7Q19AV6 140 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 MPPE1Q53F39 396 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 TXNDC11Q6PKC3 985 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 OTOP2Q7RTS6 562 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 ADAMTSL2Q86TH1 951 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SPATA6LQ8N4H0 392 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SALL3Q9BXA9 1300 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 BTBD19C9JJ37 291 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 CCNYL3P0C7X3 344 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 NAGLUP54802 743 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 FMO1Q01740 532 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 MEA1Q16626 185 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 MAPKAPK3Q16644 382 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 KLHL35Q6PF15 583 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 CDYL2Q8N8U2 506 aa10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 SMG7Q92540 1137 aaKnown RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 MRPL57Q9BQC6 102 aaKnown RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 INTS7Q9NVH2 962 aaKnown RBP10.44□□□□□ -0.74
COL4A6-203ENST00000394872 TNFAIP8O95379 198 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 ERBB2P04626 1255 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 MYBL2P10244 700 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 FAM110CQ1W6H9 321 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 FAM171BQ6P995 826 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 SPPL2BQ8TCT7 592 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 COPS8Q99627 209 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 FUCA2Q9BTY2 467 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 RACGAP1Q9H0H5 632 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 GMIPQ9P107 970 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 MSI1O43347 362 aaKnown RBP10.43□□□□□ -0.74
COL4A6-203ENST00000394872 CBX6O95503 412 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 IL6P05231 212 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PRG2P13727 222 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 WASP42768 502 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 TAF10Q12962 218 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 SPDYCQ5MJ68 293 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 DDI2Q5TDH0 399 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 KLHL17Q6TDP4 642 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 OR4A15Q8NGL6 344 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 CD101Q93033 1021 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 HDAC10Q969S8 669 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 GINS4Q9BRT9 223 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PRRG4Q9BZD6 226 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 GOLGA2P5Q9HBQ8 144 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 NEK6Q9HC98 313 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PLK2Q9NYY3 685 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PRMT3O60678 531 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 KLHL18O94889 574 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PCCBP05166 539 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 FGF1P05230 155 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 OR4Q2P0C623 313 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 TM4SF1P30408 202 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 PRKCIP41743 596 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 CACNA2D1P54289 1103 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 CDC42P60953 191 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 DGUOKQ16854 277 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 NDUFAF6Q330K2 333 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 BTN2A1Q7KYR7 527 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 SMYD1Q8NB12 490 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 NETO2Q8NC67 525 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 OR52K2Q8NGK3 314 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 ENKURQ8TC29 256 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 KLHL5Q96PQ7 755 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 GPR20Q99678 358 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 ABCG8Q9H221 673 aa10.43□□□□□ -0.74
COL4A6-203ENST00000394872 SNRPB2P08579 225 aaKnown RBP10.43□□□□□ -0.74
COL4A6-203ENST00000394872 ALOX12P18054 663 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms