RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 NXNL1Q96CM4 212 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 EMILIN2Q9BXX0 1053 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 ABCB8Q9NUT2 735 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 HAUS2Q9NVX0 235 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 DNMT3BQ9UBC3 853 aaKnown RBP20.47■□□□□ 0.87
PRKCD-202ENST00000394729 TRAV19A0A0A6YYK7 116 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 ILVBLA1L0T0 632 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 LDB2O43679 373 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 GOT2P00505 430 aaKnown RBP20.47■□□□□ 0.87
PRKCD-202ENST00000394729 PAMP19021 973 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 ARRB2P32121 409 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 PBX2P40425 430 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 PCLAFQ15004 111 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 POM121L1PQ3SYA9 428 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 VWA5B1Q5TIE3 1220 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 NLRP9Q7RTR0 991 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 GLT6D1Q7Z4J2 308 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 ALYREFQ86V81 257 aaKnown RBP20.47■□□□□ 0.87
PRKCD-202ENST00000394729 SORCS1Q8WY21 1168 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 CYP4F12Q9HCS2 524 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 VPS45Q9NRW7 570 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 FNIP2Q9P278 1114 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 FIS1Q9Y3D6 152 aa20.47■□□□□ 0.87
PRKCD-202ENST00000394729 LTBP2Q14767 1821 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 GLRA3O75311 464 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 GSRP00390 522 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 RHOP08100 348 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 SLC18A1P54219 525 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 SLC12A2P55011 1212 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 STX3Q13277 289 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 SHKBP1Q8TBC3 707 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 CLP1Q92989 425 aaKnown RBP20.46■□□□□ 0.87
PRKCD-202ENST00000394729 PSKH2Q96QS6 385 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 OLFM1Q99784 485 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 TMEM120AQ9BXJ8 343 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 STARD13Q9Y3M8 1113 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 KIAA1671Q9BY89 1806 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 TROVE2P10155 538 aaKnown RBP eCLIP20.46■□□□□ 0.87
PRKCD-202ENST00000394729 SERPINB3P29508 390 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 TRAF2Q12933 501 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 SEMA3AQ14563 771 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 CYS1Q717R9 158 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 ZNF366Q8N895 744 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 MDGA1Q8NFP4 955 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 TRIM55Q9BYV6 548 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 RXFP1Q9HBX9 757 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 HEY2Q9UBP5 337 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 WNT6Q9Y6F9 365 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 NOTCH4Q99466 2003 aa20.46■□□□□ 0.87
PRKCD-202ENST00000394729 CCDC162PA2VCL2 907 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 SLC35E2BP0CK96 405 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 CNTFP26441 200 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 ITIH4Q14624 930 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 LRRC37BQ96QE4 947 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 EBF4Q9BQW3 602 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 LRRC3Q9BY71 257 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 RHOJQ9H4E5 214 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 STK38LQ9Y2H1 464 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 TIMM44O43615 452 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 CLCN4P51793 760 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 LMAN2Q12907 356 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 USP4Q13107 963 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 TAF1BQ53T94 588 aaPredicted RBP20.45■□□□□ 0.86
PRKCD-202ENST00000394729 CCDC149Q6ZUS6 474 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 ADGRD2Q7Z7M1 963 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 C10orf82Q8WW14 230 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 NMRAL1Q9HBL8 299 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 PRKAG3Q9UGI9 489 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 TBC1D30Q9Y2I9 924 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.45■□□□□ 0.86
PRKCD-202ENST00000394729 CPA3P15088 417 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 PMLP29590 882 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 CD151P48509 253 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 AQP5P55064 265 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 DLG1Q12959 904 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 TRIM68Q6AZZ1 485 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 NAPRTQ6XQN6 538 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 HJURPQ8NCD3 748 aaPredicted RBP20.45■□□□□ 0.86
PRKCD-202ENST00000394729 ZFYVE19Q96K21 471 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 RILPQ96NA2 401 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 MGME1Q9BQP7 344 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 PNPOQ9NVS9 261 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 COPG2Q9UBF2 871 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 HAO1Q9UJM8 370 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 G3BP2Q9UN86 482 aaKnown RBP20.45■□□□□ 0.86
PRKCD-202ENST00000394729 FAM50BQ9Y247 325 aa20.45■□□□□ 0.86
PRKCD-202ENST00000394729 BRWD1Q9NSI6 2320 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 LOC285095A0A1B0GVY8 99 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 PROCP04070 461 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 STMN1P16949 149 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 ARFIP2P53365 341 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 MSLNQ13421 630 aaPredicted RBP20.44■□□□□ 0.86
PRKCD-202ENST00000394729 CCNYL1Q8N7R7 359 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 TTC8Q8TAM2 541 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 LBHD1Q9BQE6 289 aaPredicted RBP20.44■□□□□ 0.86
PRKCD-202ENST00000394729 MTG2Q9H4K7 406 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 IGFLR1Q9H665 355 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 ECT2Q9H8V3 914 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 ZDHHC4Q9NPG8 344 aa20.44■□□□□ 0.86
PRKCD-202ENST00000394729 DCDC2Q9UHG0 476 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms