RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KCNA10Q16322 511 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 ZNF470Q6ECI4 717 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 CCSAPQ6IQ19 270 aaPredicted RBP18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 RPS27LQ71UM5 84 aaKnown RBP18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 ARHGAP12Q8IWW6 846 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 FAM81AQ8TBF8 368 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 LRTOMTQ8WZ04 291 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 SLCO4A1Q96BD0 722 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 ZNF597Q96LX8 424 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 PPP1R10Q96QC0 940 aaKnown RBP18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 RHOBTB2Q9BYZ6 727 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 CYP4F12Q9HCS2 524 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 TMCC1O94876 653 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 FAM163BP0C2L3 166 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 CCNCP24863 283 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 NR1H2P55055 460 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 C1QTNF8P60827 252 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 RHDQ02161 417 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 RALGDSQ12967 914 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 FASTKQ14296 549 aaKnown RBP18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 CSHL1Q14406 222 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 SQLEQ14534 574 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 PPP1R3AQ16821 1122 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 TMEM259Q4ZIN3 620 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 TECRLQ5HYJ1 363 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 RBM20Q5T481 1227 aaKnown RBP18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 GDF6Q6KF10 455 aaPredicted RBP18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 RWDD4Q6NW29 188 aaKnown RBP18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 BORAQ6PGQ7 559 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 EGFL6Q8IUX8 553 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 KLHDC9Q8NEP7 349 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 LPGAT1Q92604 370 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 MEAF6Q9HAF1 191 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 SPC25Q9HBM1 224 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 CHST12Q9NRB3 414 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 TREX1Q9NSU2 369 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 ANXA9O76027 345 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 CSPG5O95196 566 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 INHAP05111 366 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 ADRA1AP35348 466 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 NKX3-2P78367 333 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 STX5Q13190 355 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 IKBKEQ14164 716 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 AGKQ53H12 422 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 FAM219BQ5XKK7 198 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 TOP1MTQ969P6 601 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 IL12RB2Q99665 862 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 DDX18Q9NVP1 670 aaKnown RBP18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 FBXO5Q9UKT4 447 aa18.47■□□□□ 0.55
PCDHA1-202ENST00000394633 HEATR9A2RTY3 570 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 PRORSD1PA6NEY8 169 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 H0YJX3 145 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 PSMD12O00232 456 aaPredicted RBP18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 CPB1P15086 417 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 FGFR3P22607 806 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 PCSK6P29122 969 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 CHRNA4P43681 627 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 KPNA2P52292 529 aaKnown RBP18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 TXNL4AP83876 142 aaKnown RBP18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 PFKPQ01813 784 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 POU4F1Q01851 419 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 BTBD8Q5XKL5 378 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 POTEHQ6S545 545 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 CCDC117Q8IWD4 279 aaPredicted RBP18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 ATPAF2Q8N5M1 289 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 SNX31Q8N9S9 440 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 TRPV6Q9H1D0 765 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 MRM3Q9HC36 420 aaKnown RBP18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 MRPL40Q9NQ50 206 aaKnown RBP18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 CCDC167Q9P0B6 97 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 CEPT1Q9Y6K0 416 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 A8MT66 165 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 UBDO15205 165 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 SLC12A2P55011 1212 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 CYTH1Q15438 398 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 MAPRE2Q15555 327 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 ZNF789Q5FWF6 425 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 RNF135Q8IUD6 432 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 PXYLP1Q8TE99 480 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 PTCD2Q8WV60 388 aaKnown RBP18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 RNF34Q969K3 372 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 FAR2Q96K12 515 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 OLFM1Q99784 485 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 SIK2Q9H0K1 926 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 CD300AQ9UGN4 299 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 PTCH2Q9Y6C5 1203 aa18.46■□□□□ 0.55
PCDHA1-202ENST00000394633 TCRBV3S1A0A5B6 114 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 ARHGAP10A1A4S6 786 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 MEIS3P2A8K0S8 358 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 H3BSA7 217 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 PMPCBO75439 489 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 SLC5A2P31639 672 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 GEMP55040 296 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 TRAP1Q12931 704 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 PSMD5Q16401 504 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 KIAA0930Q6ICG6 404 aaPredicted RBP18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 HMBOX1Q6NT76 420 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 CUZD1Q86UP6 607 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 HERC6Q8IVU3 1022 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms