RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GOT2P00505 430 aaKnown RBP15.16■□□□□ 0.02
GPC3-202ENST00000394299 SERPINF2P08697 491 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 KCNA5P22460 613 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 CALB2P22676 271 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 ELF1P32519 619 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 LEPRP48357 1165 aaKnown RBP15.16■□□□□ 0.02
GPC3-202ENST00000394299 SLC12A2P55011 1212 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 ARL13AQ5H913 290 aaPredicted RBP15.16■□□□□ 0.02
GPC3-202ENST00000394299 CXorf57Q6NSI4 855 aaKnown RBP15.16■□□□□ 0.02
GPC3-202ENST00000394299 KLHDC10Q6PID8 442 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 SUGP1Q8IWZ8 645 aaKnown RBP15.16■□□□□ 0.02
GPC3-202ENST00000394299 POU5F2Q8N7G0 328 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 WFDC5Q8TCV5 224 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 ADAMTS19Q8TE59 1207 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 OVCA2Q8WZ82 227 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 TSNARE1Q96NA8 513 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 CINPQ9BW66 212 aaPredicted RBP15.16■□□□□ 0.02
GPC3-202ENST00000394299 OSBPL1AQ9BXW6 950 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 MUC3BQ9H195 1237 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 DENND2DQ9H6A0 471 aaPredicted RBP15.16■□□□□ 0.02
GPC3-202ENST00000394299 IGSF5Q9NSI5 407 aa15.16■□□□□ 0.02
GPC3-202ENST00000394299 NKX1-2Q9UD57 310 aaPredicted RBP15.16■□□□□ 0.02
GPC3-202ENST00000394299 GOLGA8QA0A0J9YX86 632 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 CCDC162PA2VCL2 907 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 GOLGA8OA6NCC3 632 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 GOLGA8NF8WBI6 632 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 CHUKO15111 745 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 ENTPD5O75356 428 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 CLDN11O75508 207 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 GJA1P17302 382 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 SLC8A1P32418 973 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 WDR5P61964 334 aaKnown RBP15.15■□□□□ 0.02
GPC3-202ENST00000394299 RAB33AQ14088 237 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 HECTD2Q5U5R9 776 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 TPGS2Q68CL5 300 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 CARNMT1Q8N4J0 409 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 CCNYL1Q8N7R7 359 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 PLD4Q96BZ4 506 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 TRIB3Q96RU7 358 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 MGME1Q9BQP7 344 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 WDR55Q9H6Y2 383 aaPredicted RBP15.15■□□□□ 0.02
GPC3-202ENST00000394299 SPG21Q9NZD8 308 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 ZDHHC2Q9UIJ5 367 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 APOBEC2Q9Y235 224 aaKnown RBP15.15■□□□□ 0.02
GPC3-202ENST00000394299 CHD7Q9P2D1 2997 aa15.15■□□□□ 0.02
GPC3-202ENST00000394299 TBL1XO60907 577 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 PIGNO95427 931 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 C1RP00736 705 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 PRLP01236 227 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 URODP06132 367 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 SERPINA6P08185 405 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 KCNC1P48547 511 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 ARF5P84085 180 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 CYP4F8P98187 520 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 LIPMQ5VYY2 423 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 HS6ST3Q8IZP7 471 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 LSMEM2Q8N112 164 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 TDRD5Q8NAT2 981 aaKnown RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 RMDN1Q96DB5 314 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 FEM1CQ96JP0 617 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 PSKH2Q96QS6 385 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 BEGAINQ9BUH8 593 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 CDH19Q9H159 772 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 TLE6Q9H808 572 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 CYP4F12Q9HCS2 524 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 SEPT3Q9UH03 358 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 INSL5Q9Y5Q6 135 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 MEI4A8MW99 385 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 SLC7A4O43246 635 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 PAPSS2O95340 614 aaPredicted RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 F11P03951 625 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 CCDC166P0CW27 439 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 NCF2P19878 526 aaPredicted RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 CRABP2P29373 138 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 ERFP50548 548 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 PLK1P53350 603 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 POU4F1Q01851 419 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 PEX6Q13608 980 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 VEPH1Q14D04 833 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 ZNF549Q6P9A3 640 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 TEX9Q8N6V9 391 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 TXNDC5Q8NBS9 432 aaKnown RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 RBM15BQ8NDT2 890 aaKnown RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 MDGA1Q8NFP4 955 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 SHKBP1Q8TBC3 707 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 PDCD6IPQ8WUM4 868 aaKnown RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 CLPTM1LQ96KA5 538 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 OR52B2Q96RD2 323 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 MFSD1Q9H3U5 465 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 GPAMQ9HCL2 828 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 PLK2Q9NYY3 685 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 G3BP2Q9UN86 482 aaKnown RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 FNDC3AQ9Y2H6 1198 aaKnown RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 VWA7Q9Y334 891 aa15.14■□□□□ 0.01
GPC3-202ENST00000394299 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.14■□□□□ 0.01
GPC3-202ENST00000394299 A0A1B0GVM2 712 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 ILVBLA1L0T0 632 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 TCAF2A6NFQ2 919 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 E9PBE3 544 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 NEMP1O14524 444 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms