RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 FAM167BQ9BTA0 163 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SLC17A7Q9P2U7 560 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 MTO1Q9Y2Z2 717 aaKnown RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 PCDHB9Q9Y5E1 797 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 PRRC2BQ5JSZ5 2229 aaKnown RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 C2orf81A6NN90 581 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SRRM3A6NNA2 597 aaPredicted RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 ANKRD66B4E2M5 251 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 TRIM24O15164 1050 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 PIGNO95427 931 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ASMTLO95671 621 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 GLP2RO95838 553 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ADH1CP00326 375 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 PRLP01236 227 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ALDOAP04075 364 aaKnown RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 ADH5P11766 374 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 NEFHP12036 1026 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SRCP12931 536 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ARNTP27540 789 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 GKP32189 559 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 NEK3P51956 506 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 LIMK2P53671 638 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SNRPD1P62314 119 aaKnown RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 ECT2LQ008S8 904 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SULT2A1Q06520 285 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 RALGPS1Q5JS13 557 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 DGKKQ5KSL6 1271 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ARMC12Q5T9G4 340 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 MBLAC2Q68D91 279 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ANKRD54Q6NXT1 300 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 MICALCLQ6ZW33 695 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 GLT6D1Q7Z4J2 308 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 CAMK1DQ8IU85 385 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 LRRC34Q8IZ02 419 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 OR13J1Q8NGT2 312 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 CALML6Q8TD86 181 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 BPIFB1Q8TDL5 484 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 VPS39Q96JC1 886 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ZFYVE19Q96K21 471 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 DNAJC1Q96KC8 554 aaKnown RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 TBATAQ96M53 351 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 MAGEB18Q96M61 343 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ASB16Q96NS5 453 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SMIM14Q96QK8 99 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 VPS11Q9H270 941 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SUDS3Q9H7L9 328 aaPredicted RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 GGT7Q9UJ14 662 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SLC39A10Q9ULF5 831 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SPO11Q9Y5K1 396 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 HEPACAM2A8MVW5 462 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 AURKAO14965 403 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 AHSGP02765 367 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CYP17A1P05093 508 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ARSAP15289 507 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CTPS1P17812 591 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 SP100P23497 879 aaPredicted RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 CCNFP41002 786 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 SLC1A2P43004 574 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 MAPK8P45983 427 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 SERPINB8P50452 374 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ARSDP51689 593 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 DMC1Q14565 340 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 GRM3Q14832 879 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 QPCTQ16769 361 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 EML3Q32P44 896 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 PPM1JQ5JR12 505 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 RAPH1Q70E73 1250 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CMC1Q7Z7K0 106 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CNTN4Q8IWV2 1026 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CNPY4Q8N129 248 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 AHI1Q8N157 1196 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 OR13C4Q8NGS5 318 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 LRRC8CQ8TDW0 803 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ACMSDQ8TDX5 336 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ZNF473Q8WTR7 871 aaKnown RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 STYXQ8WUJ0 223 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 MYO19Q96H55 970 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 SLC2A11Q9BYW1 496 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 EBF3Q9H4W6 596 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CCDC134Q9H6E4 229 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ATP13A3Q9H7F0 1226 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CAB39LQ9H9S4 337 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 FBXO6Q9NRD1 293 aaPredicted RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 SNX15Q9NRS6 342 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 THG1LQ9NWX6 298 aaKnown RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 GDE1Q9NZC3 331 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 SLCO3A1Q9UIG8 710 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 FBXO5Q9UKT4 447 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 LAMA3Q16787 3333 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 OR51F1A6NGY5 319 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 SLC7A4O43246 635 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 RPP40O75818 363 aaKnown RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 PAPLNO95428 1278 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 FAM107AO95990 144 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 FOXN2P32314 431 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CRHR1P34998 444 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CD151P48509 253 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CSNK1DP48730 415 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms