RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PJA2O43164 708 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 CST8O60676 142 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 TM7SF2O76062 418 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 FTCDO95954 541 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 TOP3BO95985 862 aaKnown RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 CPP00450 1065 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 JCHAINP01591 159 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 PDHA1P08559 390 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 ALPIP09923 528 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCNB1P14635 433 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 SPINK2P20155 84 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCNCP24863 283 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 IGFALSP35858 605 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 MMP12P39900 470 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 CCT8P50990 548 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 RENBPP51606 427 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 PPIDQ08752 370 aaKnown RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 NIPAL4Q0D2K0 466 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 AP1B1Q10567 949 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 SGCGQ13326 291 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 GRM3Q14832 879 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 IRF4Q15306 451 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 TAZQ16635 292 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 IFI16Q16666 785 aaKnown RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 TMEM52BQ4KMG9 183 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 SLC45A4Q5BKX6 768 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 DENND2CQ68D51 928 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 BRAT1Q6PJG6 821 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 Q6ZSR6 202 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 ERMP1Q7Z2K6 904 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 KATNAL2Q8IYT4 538 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 BBS5Q8N3I7 341 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 LRRC57Q8N9N7 239 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 MFSD2AQ8NA29 543 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 TP53I13Q8NBR0 393 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 MAML1Q92585 1016 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 HDAC11Q96DB2 347 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 KLHDC7BQ96G42 594 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF641Q96N77 438 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 ZNF830Q96NB3 372 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 AGAP3Q96P47 875 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 OLFM3Q96PB7 478 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 ELF4Q99607 663 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 FAM118BQ9BPY3 351 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 ANP32EQ9BTT0 268 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 C1QTNF2Q9BXJ5 285 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 POLR1EQ9GZS1 481 aaKnown RBP7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 BRD8Q9H0E9 1235 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 C10orf88Q9H8K7 445 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 B4GALT6Q9UBX8 382 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 PCOLCE2Q9UKZ9 415 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 PCDHB9Q9Y5E1 797 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 RAI2Q9Y5P3 530 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 WDFY3Q8IZQ1 3526 aa7.72□□□□□ -1.17
HMGB3P1-201ENST00000393368 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 NPIPB15A6NHN6 443 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 A6NNZ2 444 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 BTNL10A8MVZ5 291 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 GOLGA6L6A8MZA4 724 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZNF487B1APH4 448 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 FPGTO14772 594 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 SCAMP1O15126 338 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 HTRA2O43464 458 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 LZTS3O60299 673 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CBFA2T3O75081 653 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 NEBLO76041 1014 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZRANB2O95218 330 aaKnown RBP eCLIP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 PGLSO95336 258 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 PCCBP05166 539 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 MMP2P08253 660 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 GM2AP17900 193 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 MX2P20592 715 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CSRP1P21291 193 aaKnown RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 LHCGRP22888 699 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 EPHA8P29322 1005 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CTNNA1P35221 906 aaKnown RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 NUDT1P36639 197 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 HSPA9P38646 679 aaKnown RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CD86P42081 329 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 SIM1P81133 766 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ELP6Q0PNE2 266 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 FOXC1Q12948 553 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZNF211Q13398 564 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 HNRNPDQ14103 355 aaKnown RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 PDE1CQ14123 709 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 TCEA2Q15560 299 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCDC157Q569K6 752 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 TIGD7Q6NT04 549 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ERAP2Q6P179 960 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 KYAT3Q6YP21 454 aaKnown RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 RFLNAQ6ZTI6 216 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ABI3BPQ7Z7G0 1075 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 TSPAN33Q86UF1 283 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZC3H18Q86VM9 953 aaKnown RBP7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 PELI3Q8N2H9 469 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 EID2Q8N6I1 236 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 CNTD1Q8N815 330 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 PNPLA1Q8N8W4 532 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 PLA2G15Q8NCC3 412 aa7.71□□□□□ -1.18
HMGB3P1-201ENST00000393368 ARRDC2Q8TBH0 407 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms