RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CTDSPLO15194 276 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TNFSF14O43557 240 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 LIASO43766 372 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 HEXIM1O94992 359 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 ZNF202O95125 648 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CH25HO95992 272 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 GLI1P08151 1106 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 PRR35P0CG20 571 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 KRT4P19013 534 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ACAT1P24752 427 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 HOXA11P31270 313 aaPredicted RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 CPOXP36551 454 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 YPEL5P62699 121 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 PRRT3Q5FWE3 981 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TTC22Q5TAA0 569 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 IL20RBQ6UXL0 311 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 KIAA0408Q6ZU52 694 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ANKS1BQ7Z6G8 1248 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 FAM90A1Q86YD7 464 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 LYSMD2Q8IV50 215 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CPXM2Q8N436 756 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 PLD5Q8N7P1 536 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 SMG8Q8ND04 991 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 TSPAN14Q8NG11 270 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 HEXDCQ8WVB3 486 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TSNARE1Q96NA8 513 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 OSBPL1AQ9BXW6 950 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TMPRSS13Q9BYE2 586 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 NSRP1Q9H0G5 558 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 EHD1Q9H4M9 534 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 SEMA4BQ9NPR2 832 aaPredicted RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.59□□□□□ -1.83
XRN1-202ENST00000392981 KIAA1257Q9ULG3 409 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ZDHHC9Q9Y397 364 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CLASP1Q7Z460 1538 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CHD1O14646 1710 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 A0A087WZ62 844 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 UQCRHLA0A096LP55 91 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 DCXO43602 365 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 DAB1O75553 588 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 IPO13O94829 963 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 UQCRHP07919 91 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 KRT19P08727 400 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 SELLP14151 372 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TNNI3P19429 210 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 GALP22466 123 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 GLRA2P23416 452 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 AHCYP23526 432 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 NMT1P30419 496 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 GABRA5P31644 462 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 FGL1Q08830 312 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CAMK4Q16566 473 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 AADACL4Q5VUY2 407 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 LRRC8EQ6NSJ5 796 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CEP57Q86XR8 500 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ZNF573Q86YE8 665 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 RBM15BQ8NDT2 890 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 PIWIL2Q8TC59 973 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 DPF1Q92782 380 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ST6GALNAC6Q969X2 333 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 THOC1Q96FV9 657 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 MFSD14AQ96MC6 490 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TUBB6Q9BUF5 446 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 WWP1Q9H0M0 922 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 NAPBQ9H115 298 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 KCNH6Q9H252 994 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 GORASP2Q9H8Y8 452 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ZDHHC7Q9NXF8 308 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 MALT1Q9UDY8 824 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 FAM153AQ9UHL3 310 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 SLC27A6Q9Y2P4 619 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CMAHPQ9Y471 501 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ZBED9Q6R2W3 1325 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 NPHP3Q7Z494 1330 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 RAD50Q92878 1312 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CUTAO60888 179 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 GDF11O95390 407 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ABHD2P08910 425 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ANXA8P13928 327 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 MAGEA1P43355 309 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 OXCT1P55809 520 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ITGA7Q13683 1181 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 CAPSQ13938 189 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 GXYLT1Q4G148 440 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 STRIP1Q5VSL9 837 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ANXA8L1Q5VT79 327 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TAPT1Q6NXT6 567 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 GALNT18Q6P9A2 607 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 LINC00696Q6ZRV3 163 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 MINDY1Q8N5J2 469 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 SIRT6Q8N6T7 355 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 PLEKHO2Q8TD55 490 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 ROBO4Q8WZ75 1007 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TCF25Q9BQ70 676 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 TRMT61BQ9BVS5 477 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 MOV10L1Q9BXT6 1211 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 YAE1D1Q9NRH1 226 aa3.59□□□□□ -1.83
XRN1-202ENST00000392981 MRPL22Q9NWU5 206 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 SIDT1Q9NXL6 827 aaKnown RBP3.59□□□□□ -1.83
XRN1-202ENST00000392981 FBXO4Q9UKT5 387 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms