RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 SGO1Q5FBB7 561 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 PRAMEF19Q5SWL8 479 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 TMEM81Q6P7N7 255 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 CREB3L2Q70SY1 520 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 LINGO2Q7L985 606 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 SHFQ7M4L6 423 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 TADA2BQ86TJ2 420 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 CHD1LQ86WJ1 897 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 CCDC105Q8IYK2 499 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 MYRIPQ8NFW9 859 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 MAGEC3Q8TD91 643 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 WFIKKN2Q8TEU8 576 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 HTRA1Q92743 480 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 ZBTB10Q96DT7 871 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 SCMH1Q96GD3 660 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 ZNF385AQ96PM9 386 aaKnown RBP2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 SLITRK1Q96PX8 696 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 PKP4Q99569 1192 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 LBHD1Q9BQE6 289 aaPredicted RBP2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 MXRA8Q9BRK3 442 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 C1QTNF4Q9BXJ3 329 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 PCDH9Q9HC56 1237 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 CYSLTR2Q9NS75 346 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 SMARCAL1Q9NZC9 954 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 PEMTQ9UBM1 199 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 SLCO3A1Q9UIG8 710 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 KIAA1210Q9ULL0 1709 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 KDM3AQ9Y4C1 1321 aa2.36□□□□□ -2.03
RNU6-541P-201ENST00000384709 MAGEA13PA6NCF6 341 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 CH25HO95992 272 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 MT-CYBP00156 380 aaPredicted RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 F9P00740 461 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 POLBP06746 335 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SNRNP70P08621 437 aaKnown RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SRCP12931 536 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 COX7A2P14406 83 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SLC2A4P14672 509 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SHMT1P34896 483 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 ERVFC1-1P60608 527 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 UFM1P61960 85 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 RPL36AP83881 106 aaKnown RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 POU3F1Q03052 451 aaPredicted RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 COASYQ13057 564 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 RNPS1Q15287 305 aaKnown RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 OASLQ15646 514 aaKnown RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 TAF12Q16514 161 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 HIST2H2ACQ16777 129 aaPredicted RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 KRT24Q2M2I5 525 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 WBP2NLQ6ICG8 309 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 FAM122CQ6P4D5 195 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SPSB3Q6PJ21 355 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 MTSS1LQ765P7 747 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 FJX1Q86VR8 437 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 CHERPQ8IWX8 916 aaKnown RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SMAP1Q8IYB5 467 aaPredicted RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 CPXCR1Q8N123 301 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 PGBD5Q8N414 524 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 RFLNBQ8N5W9 214 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 PARP16Q8N5Y8 322 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 TSPYL6Q8N831 410 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 GJC3Q8NFK1 279 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 LILRB1Q8NHL6 650 aaPredicted RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SPATA22Q8NHS9 363 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 NOC3LQ8WTT2 800 aaKnown RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 TMED6Q8WW62 240 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 FBXL8Q96CD0 374 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 BICD1Q96G01 975 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 TBATAQ96M53 351 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 NR1H4Q96RI1 486 aaPredicted RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 AGXT2Q9BYV1 514 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 GLIS2Q9BZE0 524 aaPredicted RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SLC32A1Q9H598 525 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 ESRP2Q9H6T0 727 aaKnown RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 MKKSQ9NPJ1 570 aaPredicted RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SNTG1Q9NSN8 517 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 C20orf141Q9NUB4 165 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 IL1RAPL1Q9NZN1 696 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 KCND2Q9NZV8 630 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 MPP6Q9NZW5 540 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 NFS1Q9Y697 457 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 SCINQ9Y6U3 715 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 MYH14Q7Z406 1995 aaKnown RBP2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 KAT6BQ8WYB5 2073 aa2.35□□□□□ -2.03
RNU6-541P-201ENST00000384709 LOC102724159A0A0B4J2E5 919 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 TYW5A2RUC4 315 aaKnown RBP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 LDLRAD4O15165 306 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 RFPL2O75678 378 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 RGS11O94810 467 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 PMS2P2O95744 297 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 TFP02787 698 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 GALTP07902 379 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 HNRNPA1P09651 372 aaKnown RBP eCLIP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 LINC00271P0C7V0 271 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 ETFAP13804 333 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 MAOAP21397 527 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 CLCN5P51795 746 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 DLX5P56178 289 aa2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 RRP1P56182 461 aaKnown RBP2.34□□□□□ -2.03
RNU6-541P-201ENST00000384709 EEF1A2Q05639 463 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms