RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CAPRIN1Q14444 709 aaKnown RBP18.98■□□□□ 0.63
CSPG5-202ENST00000383738 NR1D2Q14995 579 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 CCDC85BQ15834 202 aaPredicted RBP18.98■□□□□ 0.63
CSPG5-202ENST00000383738 PITRM1Q5JRX3 1037 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 GLMNQ92990 594 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 ACBD6Q9BR61 282 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 SH3GLB1Q9Y371 365 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 TBC1D3BA6NDS4 549 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 BAIAP3O94812 1187 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 OLIG2Q13516 323 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 TMEM198Q66K66 360 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 SLC44A1Q8WWI5 657 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 ZYG11BQ9C0D3 744 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 PDLIM7Q9NR12 457 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 PCDHB9Q9Y5E1 797 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 ABCA3Q99758 1704 aa18.98■□□□□ 0.63
CSPG5-202ENST00000383738 PER2O15055 1255 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ITM2AO43736 263 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 MAGEC1O60732 1142 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ITGB1P05556 798 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 MTTPP55157 894 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ABHD8Q96I13 439 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 MYOCQ99972 504 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ZNF670Q9BS34 389 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 TXLNGYQ9BZA5 131 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 HCSTQ9UBK5 93 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 UXTQ9UBK9 157 aaPredicted RBP18.97■□□□□ 0.63
CSPG5-202ENST00000383738 SYNDIG1LA6NDD5 238 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 HNRNPLP14866 589 aaKnown RBP eCLIP18.97■□□□□ 0.63
CSPG5-202ENST00000383738 GRIA1P42261 906 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 WASP42768 502 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 HSPA13P48723 471 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 STX5Q13190 355 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 CBX2Q14781 532 aaPredicted RBP18.97■□□□□ 0.63
CSPG5-202ENST00000383738 SYTL3Q4VX76 610 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 TMC5Q6UXY8 1006 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 CCDC103Q8IW40 242 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 MIER2Q8N344 545 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 PHC3Q8NDX5 983 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 TUBGCP3Q96CW5 907 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ADAMTS10Q9H324 1103 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 STBD1O95210 358 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ESRRBO95718 433 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ITGBL1O95965 494 aaPredicted RBP18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ITGAVP06756 1048 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 RPS24P62847 133 aaKnown RBP18.97■□□□□ 0.63
CSPG5-202ENST00000383738 SPIDRQ14159 915 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 OFCC1Q8IZS5 231 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 SPPL2BQ8TCT7 592 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 CALML6Q8TD86 181 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ARNTL2Q8WYA1 636 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 DDX1Q92499 740 aaKnown RBP18.97■□□□□ 0.63
CSPG5-202ENST00000383738 RERGLQ9H628 205 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 ACOT9Q9Y305 439 aa18.97■□□□□ 0.63
CSPG5-202ENST00000383738 F8W8V4 182 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CKMT2P17540 419 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CXCR3P49682 368 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 KLF10Q13118 480 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 TTC23LQ6PF05 361 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CDHR3Q6ZTQ4 885 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 RD3Q7Z3Z2 195 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 HERC6Q8IVU3 1022 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 SMG8Q8ND04 991 aaKnown RBP18.96■□□□□ 0.63
CSPG5-202ENST00000383738 AZIN2Q96A70 460 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 ZDHHC6Q9H6R6 413 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 STYXL1Q9Y6J8 313 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 J3QRK9 145 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 GPR32O75388 356 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 GLP2RO95838 553 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 KRT8P05787 483 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 MPSTP25325 297 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 PSTKQ8IV42 348 aaKnown RBP18.96■□□□□ 0.63
CSPG5-202ENST00000383738 ELMO1Q92556 727 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 FBXL8Q96CD0 374 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 MRPL40Q9NQ50 206 aaKnown RBP18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CRTAC1Q9NQ79 661 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 TMEM161AQ9NX61 479 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CFAP97Q9P2B7 532 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CYTH4Q9UIA0 394 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 SLC25A13Q9UJS0 675 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 PCDH8O95206 1070 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 ADH1AP07327 375 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 HIST1H2AGP0C0S8 130 aaPredicted RBP18.96■□□□□ 0.63
CSPG5-202ENST00000383738 HIST1H2ADP20671 130 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 SERINC5Q86VE9 423 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 C12orf50Q8NA57 414 aaPredicted RBP18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CAPSLQ8WWF8 208 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 ZFYVE19Q96K21 471 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 HIST1H2AHQ96KK5 128 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 HIST1H2AJQ99878 128 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 H2AFJQ9BTM1 129 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 BBS2Q9BXC9 721 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 TRIM54Q9BYV2 358 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 DGKBQ9Y6T7 804 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 IGKV6-21A0A0C4DH24 114 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 HEATR9A2RTY3 570 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CORO1AP31146 461 aaKnown RBP18.96■□□□□ 0.63
CSPG5-202ENST00000383738 LBX1P52954 281 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 CYP4F8P98187 520 aa18.96■□□□□ 0.63
CSPG5-202ENST00000383738 C6orf183Q5T699 404 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms