RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 RUVBL2Q9Y230 463 aaKnown RBP16.27■□□□□ 0.2
LOH12CR2-201ENST00000381800 APOBEC2Q9Y235 224 aaKnown RBP16.27■□□□□ 0.2
LOH12CR2-201ENST00000381800 OR51B4Q9Y5P0 310 aa16.27■□□□□ 0.2
LOH12CR2-201ENST00000381800 DENND4CQ5VZ89 1909 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 ZNF195O14628 629 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 PHGDHO43175 533 aaKnown RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 FGF18O76093 207 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 LUC7L3O95232 432 aaKnown RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 KRT16P08779 473 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 LINC00271P0C7V0 271 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 ABCG1P45844 678 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 SGSHP51688 502 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 TAF1AQ15573 450 aaPredicted RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 SNCBQ16143 134 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 RNF219Q5W0B1 726 aaPredicted RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 FAM45BPQ6NSW5 357 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 MRNIPQ6NTE8 343 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 HTR3DQ70Z44 454 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 CEP97Q8IW35 865 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 FSTL5Q8N475 847 aaPredicted RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 TTC8Q8TAM2 541 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 FAM45AQ8TCE6 357 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 KCTD4Q8WVF5 259 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 MRPS31Q92665 395 aaKnown RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 HDAC10Q969S8 669 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 WBP2Q969T9 261 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 CCDC126Q96EE4 140 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 TCF12Q99081 682 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 GATA5Q9BWX5 397 aaPredicted RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 TDRD1Q9BXT4 1180 aaKnown RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 LRRC3Q9BY71 257 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 FBXO6Q9NRD1 293 aaPredicted RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 NLE1Q9NVX2 485 aaPredicted RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 LSM7Q9UK45 103 aaKnown RBP16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 LZTS1Q9Y250 596 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 IRAK3Q9Y616 596 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 PTPRSQ13332 1948 aa16.26■□□□□ 0.19
LOH12CR2-201ENST00000381800 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 SLCO1B7G3V0H7 640 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 NPHS1O60500 1241 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 CBX6O95503 412 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 PENKP01210 267 aaPredicted RBP16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 RBP1P09455 135 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 HDCP19113 662 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 SUOXP51687 545 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 ARSDP51689 593 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 ZNF140P52738 457 aaPredicted RBP16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 ARF5P84085 180 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 TUBB3Q13509 450 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 FAM83EQ2M2I3 478 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 TYSND1Q2T9J0 566 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 AGAP9Q5VTM2 703 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 METTL21CQ5VZV1 264 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 CNSTQ6PJW8 725 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 METTL3Q86U44 580 aaKnown RBP16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 TMC8Q8IU68 726 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 KIRREL3Q8IZU9 778 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 TNS4Q8IZW8 715 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 FIBCD1Q8N539 461 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 DCAF4L2Q8NA75 395 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 USP13Q92995 863 aaPredicted RBP16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 UBXN10Q96LJ8 280 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 NMUR2Q9GZQ4 415 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 CDH19Q9H159 772 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 ARL8BQ9NVJ2 186 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 INTS10Q9NVR2 710 aaKnown RBP16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 HACD3Q9P035 362 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 VWA7Q9Y334 891 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 RAP2CQ9Y3L5 183 aa16.25■□□□□ 0.19
LOH12CR2-201ENST00000381800 SOBPA7XYQ1 873 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 HGSO14964 777 aaPredicted RBP16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 LYPLA1O75608 230 aaPredicted RBP16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 ATP6V1G2O95670 118 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 GLP2RO95838 553 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 CD160O95971 181 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 PRLP01236 227 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 CNPP09543 421 aaKnown RBP16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 LTA4HP09960 611 aaKnown RBP16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 IRF1P10914 325 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 AOC1P19801 751 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 CDC25CP30307 473 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 ARRB2P32121 409 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 CSNK1DP48730 415 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 RCN2Q14257 317 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 HECTD2Q5U5R9 776 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 FAM117BQ6P1L5 589 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 KIF2BQ8N4N8 673 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 GPATCH11Q8N954 259 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 OR6P1Q8NGX9 317 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 TMA16Q96EY4 203 aaKnown RBP16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 ALG14Q96F25 216 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 BTBD10Q9BSF8 475 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 CCDC106Q9BWC9 280 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 TBC1D10AQ9BXI6 508 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 ADGRE3Q9BY15 652 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 ILKAPQ9H0C8 392 aaPredicted RBP16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 MUC3BQ9H195 1237 aa16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 MMADHCQ9H3L0 296 aaPredicted RBP16.24■□□□□ 0.19
LOH12CR2-201ENST00000381800 IGSF5Q9NSI5 407 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms