RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PCK1P35558 622 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 HSPA9P38646 679 aaKnown RBP13.09□□□□□ -0.31
RPAIN-202ENST00000381208 LSSP48449 732 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 PAPOLAP51003 745 aaKnown RBP13.09□□□□□ -0.31
RPAIN-202ENST00000381208 ERVPABLB-1P60509 514 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 IL10RBQ08334 325 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 PRRT3Q5FWE3 981 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 C6orf132Q5T0Z8 1188 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 AFMIDQ63HM1 303 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 IGF2-ASQ6U949 168 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 IQCDQ96DY2 449 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 ZNF599Q96NL3 588 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 WRAP53Q9BUR4 548 aaKnown RBP13.09□□□□□ -0.31
RPAIN-202ENST00000381208 CINPQ9BW66 212 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-202ENST00000381208 BOCQ9BWV1 1114 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 SLC39A8Q9C0K1 460 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 PCDH12Q9NPG4 1184 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 KCTD5Q9NXV2 234 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 SEPT3Q9UH03 358 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 PCSK1NQ9UHG2 260 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 KLF15Q9UIH9 416 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 DOLKQ9UPQ8 538 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 ATP8A1Q9Y2Q0 1164 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 U3KQA8 63 aa13.09□□□□□ -0.31
RPAIN-202ENST00000381208 CPED1A4D0V7 1026 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 H3BRJ5 948 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 J3KR12 359 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 INSIG1O15503 277 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 TLX3O43711 291 aaPredicted RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 CSO75390 466 aaKnown RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 RASGRP1O95267 797 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 PIGNO95427 931 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 C6P13671 934 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 CTSEP14091 401 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 KELP23276 732 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 MIPP30301 263 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 MMP12P39900 470 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 ARL4AP40617 200 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 MLLT3P42568 568 aaPredicted RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 HK3P52790 923 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 PCBP4P57723 403 aaKnown RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 AP1S1P61966 158 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 BCL2L1Q07817 233 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 MTM1Q13496 603 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 ITPR1Q14643 2758 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 IRF4Q15306 451 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 CDKN3Q16667 212 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 DEFB133Q30KQ1 61 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 PPP6R3Q5H9R7 873 aaPredicted RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 RBM44Q6ZP01 1051 aaKnown RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 EFL1Q7Z2Z2 1120 aaKnown RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 ZNF571Q7Z3V5 609 aaPredicted RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 SRLQ86TD4 932 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 BBS5Q8N3I7 341 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 PAF1Q8N7H5 531 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 ZNF248Q8NDW4 579 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 OR6C4Q8NGE1 309 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 ZNF653Q96CK0 615 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 CELF6Q96J87 481 aaKnown RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 EXOC2Q96KP1 924 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 PSKH2Q96QS6 385 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 UBL7Q96S82 380 aaPredicted RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 KCTD15Q96SI1 283 aaPredicted RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 LRRC61Q9BV99 259 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 POLR1BQ9H9Y6 1135 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 MBNL1Q9NR56 388 aaKnown RBP13.08□□□□□ -0.31
RPAIN-202ENST00000381208 THSD1Q9NS62 852 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.31
RPAIN-202ENST00000381208 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 PDE2AO00408 941 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 USP12O75317 370 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 LRCH4O75427 683 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 SERPINC1P01008 464 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 HOXC4P09017 264 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 LIG3P49916 1009 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 UCNP55089 124 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 ADKP55263 362 aaKnown RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 PIGHQ14442 188 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 NFATC4Q14934 902 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 ISXQ2M1V0 245 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 WSCD2Q2TBF2 565 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 SOWAHCQ53LP3 525 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 RALGPS1Q5JS13 557 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 LRRC73Q5JTD7 316 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 TPRG1LQ5T0D9 272 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 GUSBP11Q6P575 273 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 GKN2Q86XP6 184 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 ARL10Q8N8L6 244 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 LSM14AQ8ND56 463 aaKnown RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 SYN2Q92777 582 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-202ENST00000381208 ECHDC3Q96DC8 303 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 APOOQ9BUR5 198 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 ISCUQ9H1K1 167 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 GPATCH2LQ9NWQ4 482 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 TMX2-CTNND1H3BSU7 103 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 TK2O00142 265 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 DFFAO00273 331 aa13.07□□□□□ -0.32
RPAIN-202ENST00000381208 CACNB4O00305 520 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms