RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 KCTD4Q8WVF5 259 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 SCG3Q8WXD2 468 aaKnown RBP19.35■□□□□ 0.69
GMDS-201ENST00000380805 STON2Q8WXE9 905 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 NUDCD1Q96RS6 583 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 YME1L1Q96TA2 773 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 SPON2Q9BUD6 331 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 NOD2Q9HC29 1040 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 MARCOQ9UEW3 520 aaPredicted RBP19.35■□□□□ 0.69
GMDS-201ENST00000380805 CORO1CQ9ULV4 474 aaPredicted RBP19.35■□□□□ 0.69
GMDS-201ENST00000380805 TK2O00142 265 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 ZMPSTE24O75844 475 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 CD160O95971 181 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 IRF1P10914 325 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 MYL4P12829 197 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 CALB2P22676 271 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 GLDCP23378 1020 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 KPNA2P52292 529 aaKnown RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 HTRA4P83105 476 aaPredicted RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 SMAD3P84022 425 aaKnown RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 ARF5P84085 180 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 NAPRTQ6XQN6 538 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 FSTL5Q8N475 847 aaPredicted RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 HJURPQ8NCD3 748 aaPredicted RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 MAGEC3Q8TD91 643 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 HDAC10Q969S8 669 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 PRR11Q96HE9 360 aaPredicted RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 NSL1Q96IY1 281 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 ELMO2Q96JJ3 720 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 NSMCE3Q96MG7 304 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 SLC22A12Q96S37 553 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 TDRD1Q9BXT4 1180 aaKnown RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 IL23AQ9NPF7 189 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 ARL8BQ9NVJ2 186 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 ACTL7AQ9Y615 435 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 HELZP42694 1942 aaKnown RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 FGF18O76093 207 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 S1PR4O95977 384 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 KITP10721 976 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 HOXB8P17481 243 aaPredicted RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 SLC26A3P40879 764 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 PRAMEP78395 509 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 FPGSQ05932 587 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 DLG1Q12959 904 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 INO80DQ53TQ3 878 aaPredicted RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 ZNF789Q5FWF6 425 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 MAVSQ7Z434 540 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 TTC7BQ86TV6 843 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 TSPAN17Q96FV3 270 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 GATA5Q9BWX5 397 aaPredicted RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 LRRC3Q9BY71 257 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 DNMT3BQ9UBC3 853 aaKnown RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 RUVBL2Q9Y230 463 aaKnown RBP19.34■□□□□ 0.69
GMDS-201ENST00000380805 OR51B4Q9Y5P0 310 aa19.34■□□□□ 0.69
GMDS-201ENST00000380805 RPP40O75818 363 aaKnown RBP19.33■□□□□ 0.68
GMDS-201ENST00000380805 ATP6V1G2O95670 118 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 C1RP00736 705 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 OGNP20774 298 aaKnown RBP19.33■□□□□ 0.68
GMDS-201ENST00000380805 HK2P52789 917 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 GALNT3Q14435 633 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 SNCBQ16143 134 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 RBM20Q5T481 1227 aaKnown RBP19.33■□□□□ 0.68
GMDS-201ENST00000380805 RNF219Q5W0B1 726 aaPredicted RBP19.33■□□□□ 0.68
GMDS-201ENST00000380805 LILRA6Q6PI73 481 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 TMC8Q8IU68 726 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 SUGP1Q8IWZ8 645 aaKnown RBP19.33■□□□□ 0.68
GMDS-201ENST00000380805 GPATCH11Q8N954 259 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 UBXN10Q96LJ8 280 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 OLFM1Q99784 485 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 MRPL57Q9BQC6 102 aaKnown RBP19.33■□□□□ 0.68
GMDS-201ENST00000380805 EBF4Q9BQW3 602 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 TBC1D10AQ9BXI6 508 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 DRC3Q9H069 523 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 MRPL46Q9H2W6 279 aaKnown RBP19.33■□□□□ 0.68
GMDS-201ENST00000380805 IGSF5Q9NSI5 407 aa19.33■□□□□ 0.68
GMDS-201ENST00000380805 RPL26L1Q9UNX3 145 aaKnown RBP19.33■□□□□ 0.68
GMDS-201ENST00000380805 TGM5O43548 720 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 TSPAN3O60637 253 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 LUC7L3O95232 432 aaKnown RBP19.32■□□□□ 0.68
GMDS-201ENST00000380805 PRLP01236 227 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 CNPP09543 421 aaKnown RBP19.32■□□□□ 0.68
GMDS-201ENST00000380805 SAT1P21673 171 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 AVPR1AP37288 418 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 ZNF140P52738 457 aaPredicted RBP19.32■□□□□ 0.68
GMDS-201ENST00000380805 SLC12A2P55011 1212 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 SLC7A9P82251 487 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 ZXDBP98169 803 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 ZNF460Q14592 562 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 RALGPS1Q5JS13 557 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 CLP1Q92989 425 aaKnown RBP19.32■□□□□ 0.68
GMDS-201ENST00000380805 NXNL1Q96CM4 212 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 ALG14Q96F25 216 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 LBHD1Q9BQE6 289 aaPredicted RBP19.32■□□□□ 0.68
GMDS-201ENST00000380805 CCDC106Q9BWC9 280 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 SMPD4Q9NXE4 827 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 MARCH4Q9P2E8 410 aaPredicted RBP19.32■□□□□ 0.68
GMDS-201ENST00000380805 CPSF2Q9P2I0 782 aaKnown RBP19.32■□□□□ 0.68
GMDS-201ENST00000380805 XPR1Q9UBH6 696 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 KCTD3Q9Y597 815 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 GBF1Q92538 1859 aa19.32■□□□□ 0.68
GMDS-201ENST00000380805 CBX4O00257 560 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms