RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TBL1XO60907 577 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 ATP6AP2O75787 350 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 BPGMP07738 259 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 SMIM11AP58511 58 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 PAGE2Q7Z2X7 111 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 OR4L1Q8NH43 312 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 CDH19Q9H159 772 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 LRRC4CQ9HCJ2 640 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
COL2A1-202ENST00000380518 TBC1D30Q9Y2I9 924 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 DHRS12A0PJE2 317 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 PAPSS1O43252 624 aaPredicted RBP16.13■□□□□ 0.17
COL2A1-202ENST00000380518 GSTM5P46439 218 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 MON1AQ86VX9 555 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 DEPDC4Q8N2C3 294 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 UXS1Q8NBZ7 420 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 MOSPD2Q8NHP6 518 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 TRIM63Q969Q1 353 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 TCF12Q99081 682 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 RRAGCQ9HB90 399 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 COG5Q9UP83 839 aa16.13■□□□□ 0.17
COL2A1-202ENST00000380518 OR6B1O95007 311 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 UQCRBP14927 111 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 CCR4P51679 360 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 SPIRE1Q08AE8 756 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 SCIMPQ6UWF3 145 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 DET1Q7L5Y6 550 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 CMC1Q7Z7K0 106 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 CAMKK1Q8N5S9 505 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 NELL1Q92832 810 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 Q96MT0 163 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 VPS35Q96QK1 796 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 TRIM8Q9BZR9 551 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 BTBD3Q9Y2F9 522 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 CLDN5O00501 218 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 OR6A2O95222 327 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 LCLAT1Q6UWP7 414 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 ALYREFQ86V81 257 aaKnown RBP16.12■□□□□ 0.17
COL2A1-202ENST00000380518 ZNF671Q8TAW3 534 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 SKA1Q96BD8 255 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 OSBPL11Q9BXB4 747 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 ASAH2Q9NR71 780 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 RCOR3Q9P2K3 495 aaPredicted RBP16.12■□□□□ 0.17
COL2A1-202ENST00000380518 LYPLA1O75608 230 aaPredicted RBP16.12■□□□□ 0.17
COL2A1-202ENST00000380518 PGK1P00558 417 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 GSTT1P30711 240 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 MAP2K5Q13163 448 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 BIKQ13323 160 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 KCTD21Q4G0X4 260 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 PRAMEF19Q5SWL8 479 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 KLHL17Q6TDP4 642 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 ARMC8Q8IUR7 673 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 KBTBD2Q8IY47 623 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 CSGALNACT1Q8TDX6 532 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 UBASH3BQ8TF42 649 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 LRRN4Q8WUT4 740 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 LPPQ93052 612 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 REXO5Q96IC2 774 aaKnown RBP16.12■□□□□ 0.17
COL2A1-202ENST00000380518 SLC39A8Q9C0K1 460 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 RNF208Q9H0X6 261 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 POLR1BQ9H9Y6 1135 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 ZNF624Q9P2J8 865 aaPredicted RBP16.12■□□□□ 0.17
COL2A1-202ENST00000380518 PLSCR1O15162 318 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 TLR5O60602 858 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 GPR1P46091 355 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 SMAD3P84022 425 aaKnown RBP16.12■□□□□ 0.17
COL2A1-202ENST00000380518 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 FAM180AQ6UWF9 173 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 ZC3H7AQ8IWR0 971 aaKnown RBP16.12■□□□□ 0.17
COL2A1-202ENST00000380518 COPS8Q99627 209 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 MECRQ9BV79 373 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 CLN6Q9NWW5 311 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 SLC17A7Q9P2U7 560 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 KCNE2Q9Y6J6 123 aa16.12■□□□□ 0.17
COL2A1-202ENST00000380518 DDX3YO15523 660 aaKnown RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 GJB1P08034 283 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 ADRA1BP35368 520 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 CREMQ03060 361 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 RFX4Q33E94 735 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 SLC44A1Q8WWI5 657 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 DPF3Q92784 378 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 MYDGFQ969H8 173 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 GLOD4Q9HC38 313 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 PNPLA3Q9NST1 481 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 PCDHAC2Q9Y5I4 1007 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 LYVE1Q9Y5Y7 322 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 CASZ1Q86V15 1759 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 ZW10O43264 779 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 PGM3O95394 542 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 ENO2P09104 434 aaPredicted RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 EPORP19235 508 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 HGSNATQ68CP4 663 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 COMMD2Q86X83 199 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 RBFAQ8N0V3 343 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 SPATA6LQ8N4H0 392 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 OR52L1Q8NGH7 329 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 EXOC2Q96KP1 924 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 MRPL45Q9BRJ2 306 aaKnown RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 CRNNQ9UBG3 495 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms