RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 HIPK3Q9H422 1215 aa12.7□□□□□ -0.38
VPS16-202ENST00000380445 AFF4Q9UHB7 1163 aaKnown RBP12.7□□□□□ -0.38
VPS16-202ENST00000380445 A6NHS1 94 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 H0Y3Z8 333 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 NPHS1O60500 1241 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 CLDN11O75508 207 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 RBP1P09455 135 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ATXN1LP0C7T5 689 aaKnown RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 SLC26A3P40879 764 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 DNAJB13P59910 316 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ROR2Q01974 943 aaKnown RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 ZRSR2Q15696 482 aaKnown RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 IL31Q6EBC2 164 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ALG1LQ6GMV1 187 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 PIWIL4Q7Z3Z4 852 aaKnown RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 NET1Q7Z628 596 aaPredicted RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 PTAR1Q7Z6K3 402 aaPredicted RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 ZNF296Q8WUU4 475 aaPredicted RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 SCLYQ96I15 445 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 PDFQ9HBH1 243 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 TCF7L2Q9NQB0 619 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 TRPM5Q9NZQ8 1165 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 STOML1Q9UBI4 398 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 SEPT3Q9UH03 358 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 RIMKLBQ9ULI2 386 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 MYLKQ15746 1914 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 DLX3O60479 287 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 SMIM24O75264 130 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 PIGNO95427 931 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 LTA4HP09960 611 aaKnown RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 ATP5F1P24539 256 aaPredicted RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 ZNF460Q14592 562 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 RFTN1Q14699 578 aaPredicted RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 KPNB1Q14974 876 aaKnown RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 TRMT5Q32P41 509 aaKnown RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 ARL13AQ5H913 290 aaPredicted RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 VWA5B1Q5TIE3 1220 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ACAD11Q709F0 780 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS16-202ENST00000380445 BRSK1Q8TDC3 778 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 BCL7CQ8WUZ0 217 aaPredicted RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 HEXDCQ8WVB3 486 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 HDAC10Q969S8 669 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 THTPAQ9BU02 230 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS16-202ENST00000380445 LMCD1Q9NZU5 365 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 VWA7Q9Y334 891 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ZNF840PA6NDX5 716 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 LDB2O43679 373 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 EFEMP2O95967 443 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 TFEBP19484 476 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 CES1P23141 567 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ACVR1Q04771 509 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 CCDC6Q16204 474 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 TAF12Q16514 161 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ACSBG2Q5FVE4 666 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 TPGS2Q68CL5 300 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 MRNIPQ6NTE8 343 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 CFAP52Q8N1V2 620 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 B4GALNT2Q8NHY0 566 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ZNF461Q8TAF7 563 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 CNDP1Q96KN2 507 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 DDX50Q9BQ39 737 aaKnown RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 GPAMQ9HCL2 828 aa12.69□□□□□ -0.38
VPS16-202ENST00000380445 ZFP37Q9Y6Q3 630 aaPredicted RBP12.69□□□□□ -0.38
VPS16-202ENST00000380445 GLP2RO95838 553 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 CHRNGP07510 517 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 SLC6A4P31645 630 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 CCL23P55773 120 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 OXCT1P55809 520 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 CSHL1Q14406 222 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 ACAP2Q15057 778 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 SLC9B1Q4ZJI4 515 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 HECTD2Q5U5R9 776 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 FAM45BPQ6NSW5 357 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 ULK2Q8IYT8 1036 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 FAM45AQ8TCE6 357 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 IGSF21Q96ID5 467 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 MGME1Q9BQP7 344 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 CINPQ9BW66 212 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 UNC93B1Q9H1C4 597 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 SUDS3Q9H7L9 328 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 UBA2Q9UBT2 640 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 ADAM12O43184 909 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 KDELR3O43731 214 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 NDST3O95803 873 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 MPSTP25325 297 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 ADSLP30566 484 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 RANBP1P43487 201 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 ALDH1A3P47895 512 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 PPP3CCP48454 512 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 PTDSS1P48651 473 aaKnown RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 DLG1Q12959 904 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 ZNF177Q13360 481 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 IKBKEQ14164 716 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 IHHQ14623 411 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 RBM20Q5T481 1227 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms