RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 NAPRTQ6XQN6 538 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 MFSD6LQ8IWD5 586 aa23.25■■□□□ 1.31
VPS16-201ENST00000380443 CPSF2Q9P2I0 782 aaKnown RBP23.25■■□□□ 1.31
VPS16-201ENST00000380443 RHOCP08134 193 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 RBP1P09455 135 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 ARRB2P32121 409 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 ELF1P32519 619 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 GMPRP36959 345 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 RINLQ6ZS11 566 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 TREML1Q86YW5 311 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 CMTR2Q8IYT2 770 aaKnown RBP23.24■■□□□ 1.31
VPS16-201ENST00000380443 TDRD5Q8NAT2 981 aaKnown RBP23.24■■□□□ 1.31
VPS16-201ENST00000380443 NUDCD1Q96RS6 583 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.24■■□□□ 1.31
VPS16-201ENST00000380443 PRKAG2Q9UGJ0 569 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 ALPK3Q96L96 1907 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 A8MUI8 341 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 B2RBV5 119 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 ENO1P06733 434 aaKnown RBP23.24■■□□□ 1.31
VPS16-201ENST00000380443 F7P08709 466 aaPredicted RBP23.24■■□□□ 1.31
VPS16-201ENST00000380443 PRDX6P30041 224 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 AVPR1AP37288 418 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 GRIA4P48058 902 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 CREMQ03060 361 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 MRNIPQ6NTE8 343 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 CNSTQ6PJW8 725 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 DDX53Q86TM3 631 aaKnown RBP23.24■■□□□ 1.31
VPS16-201ENST00000380443 TCEAL8Q8IYN2 117 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 KIRREL3Q8IZU9 778 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 OR6P1Q8NGX9 317 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 HDAC10Q969S8 669 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 NXNL1Q96CM4 212 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 SPG21Q9NZD8 308 aa23.24■■□□□ 1.31
VPS16-201ENST00000380443 A0A0D9SEW6 157 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 TK2O00142 265 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 MUSKO15146 869 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 RPP40O75818 363 aaKnown RBP23.23■■□□□ 1.31
VPS16-201ENST00000380443 CRTAMO95727 393 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 URODP06132 367 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 OGNP20774 298 aaKnown RBP23.23■■□□□ 1.31
VPS16-201ENST00000380443 ATP5F1P24539 256 aaPredicted RBP23.23■■□□□ 1.31
VPS16-201ENST00000380443 RPL14P50914 215 aaKnown RBP23.23■■□□□ 1.31
VPS16-201ENST00000380443 EPHB3P54753 998 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 PREPLQ4J6C6 727 aaPredicted RBP23.23■■□□□ 1.31
VPS16-201ENST00000380443 FAM45BPQ6NSW5 357 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 MAVSQ7Z434 540 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 OR7D4Q8NG98 312 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 FAM45AQ8TCE6 357 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 TRIB3Q96RU7 358 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.23■■□□□ 1.31
VPS16-201ENST00000380443 NOP53Q9NZM5 478 aaKnown RBP23.23■■□□□ 1.31
VPS16-201ENST00000380443 XPR1Q9UBH6 696 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 VWA7Q9Y334 891 aa23.23■■□□□ 1.31
VPS16-201ENST00000380443 GLP2RO95838 553 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 KLKB1P03952 638 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 LTA4HP09960 611 aaKnown RBP23.22■■□□□ 1.31
VPS16-201ENST00000380443 PSMA3P25788 255 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 RAP1GDS1P52306 607 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 PLD1Q13393 1074 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 PABPC1LQ4VXU2 614 aaKnown RBP23.22■■□□□ 1.31
VPS16-201ENST00000380443 HECTD2Q5U5R9 776 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 PIWIL4Q7Z3Z4 852 aaKnown RBP23.22■■□□□ 1.31
VPS16-201ENST00000380443 ITIH5Q86UX2 942 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 ZNF781Q8N8C0 355 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 PRICKLE1Q96MT3 831 aaPredicted RBP23.22■■□□□ 1.31
VPS16-201ENST00000380443 SPON2Q9BUD6 331 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 COG4Q9H9E3 785 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 POPDC3Q9HBV1 291 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 TMEM39AQ9NV64 488 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 AGO1Q9UL18 857 aaKnown RBP23.22■■□□□ 1.31
VPS16-201ENST00000380443 PRR5-ARHGAP8B1AHC4 643 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 MATN2O00339 956 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 HDAC3O15379 428 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 INSIG1O15503 277 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 DLX3O60479 287 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 S1PR4O95977 384 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 CLTBP09497 229 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 RPS24P62847 133 aaKnown RBP23.22■■□□□ 1.31
VPS16-201ENST00000380443 ARHGAP8P85298 464 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 ACAP2Q15057 778 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 ATG14Q6ZNE5 492 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 SDCCAG8Q86SQ7 713 aaPredicted RBP23.22■■□□□ 1.31
VPS16-201ENST00000380443 ENDOVQ8N8Q3 282 aaKnown RBP23.22■■□□□ 1.31
VPS16-201ENST00000380443 CMTM5Q96DZ9 223 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 EBF2Q9HAK2 575 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 RNPEPL1Q9HAU8 725 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 IGSF5Q9NSI5 407 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 NCKIPSDQ9NZQ3 722 aa23.22■■□□□ 1.31
VPS16-201ENST00000380443 PRRG1O14668 218 aa23.21■■□□□ 1.31
VPS16-201ENST00000380443 DIAPH2O60879 1101 aa23.21■■□□□ 1.31
VPS16-201ENST00000380443 PENKP01210 267 aaPredicted RBP23.21■■□□□ 1.31
VPS16-201ENST00000380443 CR2P20023 1033 aa23.21■■□□□ 1.31
VPS16-201ENST00000380443 TMC7Q7Z402 723 aa23.21■■□□□ 1.31
VPS16-201ENST00000380443 PTAR1Q7Z6K3 402 aaPredicted RBP23.21■■□□□ 1.31
VPS16-201ENST00000380443 HEXDCQ8WVB3 486 aa23.21■■□□□ 1.31
VPS16-201ENST00000380443 CNDP1Q96KN2 507 aa23.21■■□□□ 1.31
VPS16-201ENST00000380443 UBXN10Q96LJ8 280 aa23.21■■□□□ 1.31
VPS16-201ENST00000380443 ANKRD27Q96NW4 1050 aa23.21■■□□□ 1.31
VPS16-201ENST00000380443 RC3H2Q9HBD1 1191 aaKnown RBP23.21■■□□□ 1.31
VPS16-201ENST00000380443 COL4A6Q14031 1691 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms