RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 DOCK4Q8N1I0 1966 aa21.69■■□□□ 1.06
TRIM54-202ENST00000380075 C5orf67F2Z3F1 127 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 MATN2O00339 956 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 HDAC3O15379 428 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 SERPINB5P36952 375 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 LEPRP48357 1165 aaKnown RBP21.68■■□□□ 1.06
TRIM54-202ENST00000380075 NUMBP49757 651 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 RPL14P50914 215 aaKnown RBP21.68■■□□□ 1.06
TRIM54-202ENST00000380075 MSLNQ13421 630 aaPredicted RBP21.68■■□□□ 1.06
TRIM54-202ENST00000380075 CMPK2Q5EBM0 449 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 TMCO4Q5TGY1 634 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 RNF19BQ6ZMZ0 732 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 IGSF21Q96ID5 467 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 GPR78Q96P69 363 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 KLHL5Q96PQ7 755 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 XPR1Q9UBH6 696 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 SLC27A5Q9Y2P5 690 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 LOC285095A0A1B0GVY8 99 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 MROH6A6NGR9 719 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 EPOPA6NHQ4 379 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 FGF18O76093 207 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 PSMG1O95456 288 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 CPOXP36551 454 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 AVPR1AP37288 418 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 DSC2Q02487 901 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 USP4Q13107 963 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 LBRQ14739 615 aaKnown RBP21.68■■□□□ 1.06
TRIM54-202ENST00000380075 C5orf22Q49AR2 442 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 KDELC2Q7Z4H8 507 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 CEP97Q8IW35 865 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 MFSD6LQ8IWD5 586 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 ULK2Q8IYT8 1036 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 GPATCH11Q8N954 259 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 ARRDC2Q8TBH0 407 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 SAMD11Q96NU1 681 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 TTPALQ9BTX7 342 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 POLR1EQ9GZS1 481 aaKnown RBP21.68■■□□□ 1.06
TRIM54-202ENST00000380075 MFSD1Q9H3U5 465 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 LRRC42Q9Y546 428 aa21.68■■□□□ 1.06
TRIM54-202ENST00000380075 NPHS1O60500 1241 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 TLR5O60602 858 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 PRAMEF11O60813 436 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 SOAT2O75908 522 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 VNN2O95498 520 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 OR1E1P30953 314 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 TAS2R39P59534 338 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 DNAJB13P59910 316 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 MAXP61244 160 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 CCDC6Q16204 474 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 SEL1L3Q68CR1 1132 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 FBXO22Q8NEZ5 403 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 WDR60Q8WVS4 1066 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 NXNL1Q96CM4 212 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 CCDC126Q96EE4 140 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 STX18Q9P2W9 335 aaKnown RBP21.67■■□□□ 1.06
TRIM54-202ENST00000380075 VGLL3A8MV65 326 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 F5H5T6 163 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 H0Y3Z8 333 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 SLC22A2O15244 555 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 EPOP01588 193 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 RB1P06400 928 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 HLA-DPA1P20036 260 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 TACR2P21452 398 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 PPM1AP35813 382 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 PTDSS1P48651 473 aaKnown RBP21.67■■□□□ 1.06
TRIM54-202ENST00000380075 SLC14A2Q15849 920 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 FAM83EQ2M2I3 478 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 RTP2Q5QGT7 225 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 VWA5B1Q5TIE3 1220 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 TMC7Q7Z402 723 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 FBXO27Q8NI29 283 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 SCG3Q8WXD2 468 aaKnown RBP21.67■■□□□ 1.06
TRIM54-202ENST00000380075 OVCA2Q8WZ82 227 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 FEM1CQ96JP0 617 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 B3GALT6Q96L58 329 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 OMDQ99983 421 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 THTPAQ9BU02 230 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 CRISPLD1Q9H336 500 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 TCF7L2Q9NQB0 619 aa21.67■■□□□ 1.06
TRIM54-202ENST00000380075 UXTQ9UBK9 157 aaPredicted RBP21.67■■□□□ 1.06
TRIM54-202ENST00000380075 SLC38A8A6NNN8 435 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 RFXAPO00287 272 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 DLX3O60479 287 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 HMBSP08397 361 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 NCF2P19878 526 aaPredicted RBP21.66■■□□□ 1.06
TRIM54-202ENST00000380075 GLDCP23378 1020 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 GLRBP48167 497 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 RCN1Q15293 331 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 ARL13AQ5H913 290 aaPredicted RBP21.66■■□□□ 1.06
TRIM54-202ENST00000380075 AGAP9Q5VTM2 703 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 RSPO2Q6UXX9 243 aaPredicted RBP21.66■■□□□ 1.06
TRIM54-202ENST00000380075 PIWIL4Q7Z3Z4 852 aaKnown RBP21.66■■□□□ 1.06
TRIM54-202ENST00000380075 PDZD8Q8NEN9 1154 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 OR13J1Q8NGT2 312 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 TMEM169Q96HH4 297 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 VN1R3Q9BXE9 311 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.66■■□□□ 1.06
TRIM54-202ENST00000380075 MYLKQ15746 1914 aa21.66■■□□□ 1.06
TRIM54-202ENST00000380075 PIGNO95427 931 aa21.65■■□□□ 1.06
TRIM54-202ENST00000380075 FGF1P05230 155 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms