RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 USP38Q8NB14 1042 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 RXFP2Q8WXD0 754 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 UPB1Q9UBR1 384 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 SNX7Q9UNH6 387 aa11.29□□□□□ -0.6
PTCHD1-201ENST00000379361 PNPLA6Q8IY17 1366 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ITIH1P19827 911 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ATP5C1P36542 298 aaKnown RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TMEM192Q8IY95 271 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 MEIOBQ8N635 442 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 KLHL32Q96NJ5 620 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 POPDC2Q9HBU9 364 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 IKZF3Q9UKT9 509 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TBL1XO60907 577 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ASB7Q9H672 318 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 HYKKA2RU49 373 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 CYP11B2P19099 503 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 PRR5P85299 388 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 PIK3C3Q8NEB9 887 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 WDR24Q96S15 920 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 GRIP2Q9C0E4 1043 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 PCDHGB1Q9Y5G3 927 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TRPV2Q9Y5S1 764 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 A0A087X0B3 334 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ZCCHC18P0CG32 403 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 GJA1P17302 382 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 BMPR2Q13873 1038 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 PFKFB4Q16877 469 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TIFAQ96CG3 184 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 MGME1Q9BQP7 344 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 GMPPBQ9Y5P6 360 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 MYPNQ86TC9 1320 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 GSG1L2A8MUP6 293 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TTC34A8MYJ7 566 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF155Q12901 538 aaPredicted RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 RFX4Q33E94 735 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC9A4Q6AI14 798 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 RAD51AP1Q96B01 352 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 C5orf34Q96MH7 638 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ARHGEF33A8MVX0 844 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF432O94892 652 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 NAA30Q147X3 362 aaPredicted RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 HKDC1Q2TB90 917 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 FAM92BQ6ZTR7 304 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 B3GALT6Q96L58 329 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 UROC1Q96N76 676 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 NOL4O94818 638 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC25A14O95258 325 aaPredicted RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 LTA4HP09960 611 aaKnown RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 GZMAP12544 262 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 DGCR6Q14129 220 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 RASA2Q15283 850 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ABCA11PQ4W5N1 156 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 DHRSXQ8N5I4 330 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 OR7A2PQ8NGA2 310 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 PIGKQ92643 395 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 CISHQ9NSE2 258 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 OR14I1A6ND48 311 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ELFN1P0C7U0 828 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 MTDHQ86UE4 582 aaKnown RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 SPATA20Q8TB22 786 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TLE6Q9H808 572 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 CASP6P55212 293 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 N4BP2L1Q5TBK1 243 aaPredicted RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 EXOC2Q96KP1 924 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 PLA2G12BQ9BX93 195 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 CHD2O14647 1828 aaKnown RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TAS2R50P59544 299 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 PCNX4Q63HM2 1172 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 TPGS1Q6ZTW0 290 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 ABCC13Q9NSE7 274 aa11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 RBM12Q9NTZ6 932 aaKnown RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 RGS17Q9UGC6 210 aaPredicted RBP11.28□□□□□ -0.6
PTCHD1-201ENST00000379361 FAM172BPA6NC97 362 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 ANPEPP15144 967 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 BGNP21810 368 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 PPIBP23284 216 aaKnown RBP11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 LARS2Q15031 903 aaKnown RBP11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 GIPC3Q8TF64 312 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 DNASE1L2Q92874 299 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC25A23Q9BV35 468 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 PFDN2Q9UHV9 154 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 CDH5P33151 784 aaPredicted RBP11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 CD86P42081 329 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC6A9P48067 706 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 MRPS22P82650 360 aaKnown RBP11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 GPR156Q8NFN8 814 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 RNF121Q9H920 327 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 MRPS7Q9Y2R9 242 aaKnown RBP11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 PCDHA11Q9Y5I1 949 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 ALAS2P22557 587 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 CYP2C18P33260 490 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 KCNJ1P48048 391 aa11.27□□□□□ -0.6
PTCHD1-201ENST00000379361 NECTIN1Q15223 517 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms