RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 BPGMP07738 259 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 SYN1P17600 705 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 GRM3Q14832 879 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 FAM151BQ6UXP7 276 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 RNF19BQ6ZMZ0 732 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 PIWIL4Q7Z3Z4 852 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 METTL3Q86U44 580 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 DEFB107AQ8IZN7 70 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 ING5Q8WYH8 240 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 THUMPD3Q9BV44 507 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 RUBCNLQ9H714 662 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 ZNF510Q9Y2H8 683 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 TCAF1Q9Y4C2 921 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 NR5A2O00482 541 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 TPST1O60507 370 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 LYPLA1O75608 230 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 IL1BP01584 269 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 ITGB1P05556 798 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 UGT2B4P06133 528 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 ETS2P15036 469 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 ARHGDIAP52565 204 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 MPP1Q00013 466 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 INPP5AQ14642 412 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 SETMARQ53H47 684 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 ADGRF1Q5T601 910 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 UNC5BQ8IZJ1 945 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 MCOLN3Q8TDD5 553 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 RPL10LQ96L21 214 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 AGAP2Q99490 1192 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 MRPL57Q9BQC6 102 aaKnown RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 SEMA4BQ9NPR2 832 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 MAN1C1Q9NR34 630 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 FAM72CH0Y354 149 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 AKAP10O43572 662 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 DNAJC8O75937 253 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 CSF2RAP15509 400 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 CDH13P55290 713 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 HIST2H2ACQ16777 129 aaPredicted RBP14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 FAM72AQ5TYM5 149 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 HIST2H2AA3Q6FI13 130 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 FAM72DQ6L9T8 149 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 FAM72BQ86X60 149 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 TMPRSS6Q8IU80 811 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 SYTL1Q8IYJ3 562 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 GALNT4Q8N4A0 578 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 HIC2Q96JB3 615 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 HGH1Q9BTY7 390 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 SOX13Q9UN79 622 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 CITO14578 2027 aa14.26□□□□□ -0.13
SHROOM1-203ENST00000378679 UGT1A9O60656 530 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 MSLNQ13421 630 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 CACHD1Q5VU97 1274 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 SNX30Q5VWJ9 437 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 UGT1A7Q9HAW7 530 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 UGT1A10Q9HAW8 530 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 UGT1A8Q9HAW9 530 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 EIF2B3Q9NR50 452 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 ARL15Q9NXU5 204 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 CCDC167Q9P0B6 97 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 ZNF180Q9UJW8 692 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 INSL6Q9Y581 213 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 BAIAP3O94812 1187 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 HNRNPLP14866 589 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 CRHR1P34998 444 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 LIMK2P53671 638 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 FUT11Q495W5 492 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 FSTL4Q6MZW2 842 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 YTHDF3Q7Z739 585 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 TRAPPC5Q8IUR0 188 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 DENND6AQ8IWF6 608 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 OR56A4Q8NGH8 313 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 FCRL5Q96RD9 977 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 ZCCHC2Q9C0B9 1178 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 TNKS2Q9H2K2 1166 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 V9GYQ6 96 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 KIAA1551Q9HCM1 1747 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 LAMB2P55268 1798 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 BIRC5O15392 142 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 HAPLN1P10915 354 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 VHLP40337 213 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 PAFAH1B3Q15102 231 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 BNC2Q6ZN30 1099 aaPredicted RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 DET1Q7L5Y6 550 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 RNF148Q8N7C7 305 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 TRPV1Q8NER1 839 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 EME1Q96AY2 570 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 PLD4Q96BZ4 506 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 DNAJC1Q96KC8 554 aaKnown RBP14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 ECSITQ9BQ95 431 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 TBC1D14Q9P2M4 693 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 LNPEPQ9UIQ6 1025 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 ZMYM5Q9UJ78 669 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 COL24A1Q17RW2 1714 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 J3KR12 359 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 ABLIM1O14639 778 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 MGEA5O60502 916 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 KRT6AP02538 564 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 KRT6BP04259 564 aa14.25□□□□□ -0.13
SHROOM1-203ENST00000378679 KRT6CP48668 564 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms