RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MMP12P39900 470 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 CCNG2Q16589 344 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 LONRF2Q1L5Z9 754 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ZNF284Q2VY69 593 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 DRICH1Q6PGQ1 229 aaPredicted RBP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SLC23A3Q6PIS1 610 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 PIH1D2Q8WWB5 315 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SCRN2Q96FV2 425 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 OSBPL9Q96SU4 736 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ORAI3Q9BRQ5 295 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ADGRE3Q9BY15 652 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 MIR1-1HGQ9H1L0 117 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 PCDH9Q9HC56 1237 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 TMEM74BQ9NUR3 256 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 DNPEPQ9ULA0 475 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ZFR2Q9UPR6 939 aaKnown RBP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 OPHN1O60890 802 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 CYP2A6P11509 494 aaPredicted RBP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 TCP1P17987 556 aaKnown RBP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 NFKB1P19838 968 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 MAOBP27338 520 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 RACK1P63244 317 aaKnown RBP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SPEM2Q0P670 501 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SGCGQ13326 291 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 IHHQ14623 411 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SIX1Q15475 284 aaPredicted RBP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ANKRD20A2Q5SQ80 823 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ANKRD20A1Q5TYW2 823 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ANKRD20A3Q5VUR7 823 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 USP45Q70EL2 814 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 DPPA4Q7L190 304 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ADAT2Q7Z6V5 191 aaKnown RBP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SPATA13Q96N96 652 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 RBM15Q96T37 977 aaKnown RBP eCLIP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SLC17A9Q9BYT1 436 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 GBA3Q9H227 469 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 C10orf88Q9H8K7 445 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SEMA4GQ9NTN9 838 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 FAM153AQ9UHL3 310 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 RSPH14Q9UHP6 348 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 SLC6A14Q9UN76 642 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 OTOGLQ3ZCN5 2332 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 ATXN2Q99700 1313 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 VPS13AQ96RL7 3174 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 PRAMEF26H0Y7S4 382 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 KHNYNO15037 678 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 GCATO75600 419 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 AFF3P51826 1226 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 EPHB1P54762 984 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 FAM193AP78312 1265 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 TEAD4Q15561 434 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 OASLQ15646 514 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 ZCCHC9Q8N567 271 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 FAM174AQ8TBP5 190 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 ACTRT1Q8TDG2 376 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 SKA1Q96BD8 255 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 RTP4Q96DX8 246 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 LENG8Q96PV6 779 aaPredicted RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 MCCC1Q96RQ3 725 aaPredicted RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 NAPGQ99747 312 aaPredicted RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 C1QTNF7Q9BXJ2 289 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 EBF2Q9HAK2 575 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 TM9SF3Q9HD45 589 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 GGT7Q9UJ14 662 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 CHKBQ9Y259 395 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 ITM2BQ9Y287 266 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 DRG1Q9Y295 367 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 TRPM6Q9BX84 2022 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 IGLON5A6NGN9 336 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 ANXA9O76027 345 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 TM7SF2O76062 418 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 PRLP01236 227 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 EPOP01588 193 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 ITGAVP06756 1048 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 PDHA1P08559 390 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 TGM1P22735 817 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 MAT2AP31153 395 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 AKT2P31751 481 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 VIPR1P32241 457 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 GRIA4P48058 902 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 CDK18Q07002 472 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 MPP3Q13368 585 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 PRPSAP1Q14558 356 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 AGERQ15109 404 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 TRIM61Q5EBN2 209 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 LRRC73Q5JTD7 316 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 PAPD7Q5XG87 772 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 SEL1L3Q68CR1 1132 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 DENND6BQ8NEG7 585 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 ATG4AQ8WYN0 398 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 SERAC1Q96JX3 654 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 WDR24Q96S15 920 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 TMEM121Q9BTD3 319 aa13.31□□□□□ -0.28
CKAP2-202ENST00000378034 NUSAP1Q9BXS6 441 aaKnown RBP13.31□□□□□ -0.28
CKAP2-202ENST00000378034 KCTD5Q9NXV2 234 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms