RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 WSCD2Q2TBF2 565 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 C6orf132Q5T0Z8 1188 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 SRLQ86TD4 932 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 LUZP1Q86V48 1076 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 TSEN2Q8NCE0 465 aaKnown RBP21.21■□□□□ 0.99
VSX1-201ENST00000376707 TPCN2Q8NHX9 752 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 ZNF653Q96CK0 615 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 CINPQ9BW66 212 aaPredicted RBP21.21■□□□□ 0.99
VSX1-201ENST00000376707 BOCQ9BWV1 1114 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 TRIM7Q9C029 511 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 DOLKQ9UPQ8 538 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 ATP8A1Q9Y2Q0 1164 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 SCINQ9Y6U3 715 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 A0A1W2PQJ5 194 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 YY2O15391 372 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 TSHRP16473 764 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 MMP12P39900 470 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 RGRP47804 291 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 LIG3P49916 1009 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 TPM4P67936 248 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 ISXQ2M1V0 245 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 AFMIDQ63HM1 303 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 CRTC1Q6UUV9 634 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 HID1Q8IV36 788 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 PSTKQ8IV42 348 aaKnown RBP21.2■□□□□ 0.98
VSX1-201ENST00000376707 ARHGAP12Q8IWW6 846 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 SLC35F3Q8IY50 421 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 FSTL5Q8N475 847 aaPredicted RBP21.2■□□□□ 0.98
VSX1-201ENST00000376707 NAT6Q93015 286 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 TRIM11Q96F44 468 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 ZNF578Q96N58 590 aaPredicted RBP21.2■□□□□ 0.98
VSX1-201ENST00000376707 BBC3Q96PG8 261 aaPredicted RBP21.2■□□□□ 0.98
VSX1-201ENST00000376707 LGMNQ99538 433 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 CLPBQ9H078 707 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 POLR1BQ9H9Y6 1135 aa21.2■□□□□ 0.98
VSX1-201ENST00000376707 LRCH4O75427 683 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 PRKCGP05129 697 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 MYBL1P10243 752 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 SKILP12757 684 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 CTSEP14091 401 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 LSSP48449 732 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 ZNF135P52742 658 aaPredicted RBP21.19■□□□□ 0.98
VSX1-201ENST00000376707 HK3P52790 923 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 FANCCQ00597 558 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 BCL2L1Q07817 233 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 INPP5AQ14642 412 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 RFTN1Q14699 578 aaPredicted RBP21.19■□□□□ 0.98
VSX1-201ENST00000376707 ELOCQ15369 112 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 ESRP1Q6NXG1 681 aaKnown RBP21.19■□□□□ 0.98
VSX1-201ENST00000376707 ENPP7Q6UWV6 458 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 RBM44Q6ZP01 1051 aaKnown RBP21.19■□□□□ 0.98
VSX1-201ENST00000376707 ZSWIM9Q86XI8 627 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 NPWQ8N729 165 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 SCG3Q8WXD2 468 aaKnown RBP21.19■□□□□ 0.98
VSX1-201ENST00000376707 SYN2Q92777 582 aaPredicted RBP21.19■□□□□ 0.98
VSX1-201ENST00000376707 TSACCQ96A04 125 aaPredicted RBP21.19■□□□□ 0.98
VSX1-201ENST00000376707 APOOQ9BUR5 198 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 ISCUQ9H1K1 167 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 PRORYQ9H606 182 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 MRPL47Q9HD33 250 aaKnown RBP21.19■□□□□ 0.98
VSX1-201ENST00000376707 MYO1AQ9UBC5 1043 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 RAI2Q9Y5P3 530 aa21.19■□□□□ 0.98
VSX1-201ENST00000376707 RASGRP1O95267 797 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 PCCBP05166 539 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 ALPIP09923 528 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 HCAR3P49019 387 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 PCBP4P57723 403 aaKnown RBP21.18■□□□□ 0.98
VSX1-201ENST00000376707 IL10RBQ08334 325 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 NFATC4Q14934 902 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 AGERQ15109 404 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 PERM1Q5SV97 790 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 HGSNATQ68CP4 663 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 ARHGAP36Q6ZRI8 547 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 CYP4V2Q6ZWL3 525 aaPredicted RBP21.18■□□□□ 0.98
VSX1-201ENST00000376707 RD3Q7Z3Z2 195 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 ZNF248Q8NDW4 579 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 ATL2Q8NHH9 583 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 FCRL3Q96P31 734 aaPredicted RBP21.18■□□□□ 0.98
VSX1-201ENST00000376707 UBL7Q96S82 380 aaPredicted RBP21.18■□□□□ 0.98
VSX1-201ENST00000376707 ZWILCHQ9H900 591 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 CWC15Q9P013 229 aaKnown RBP21.18■□□□□ 0.98
VSX1-201ENST00000376707 PADI4Q9UM07 663 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 OR1A2Q9Y585 309 aa21.18■□□□□ 0.98
VSX1-201ENST00000376707 BZW2Q9Y6E2 419 aaKnown RBP21.18■□□□□ 0.98
VSX1-201ENST00000376707 IGSF10Q6WRI0 2623 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 DXOO77932 396 aaKnown RBP21.17■□□□□ 0.98
VSX1-201ENST00000376707 CELA2BP08218 269 aaPredicted RBP21.17■□□□□ 0.98
VSX1-201ENST00000376707 POLR2LP62875 67 aaKnown RBP21.17■□□□□ 0.98
VSX1-201ENST00000376707 TLE3Q04726 772 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 NSUN2Q08J23 767 aaKnown RBP eCLIP21.17■□□□□ 0.98
VSX1-201ENST00000376707 MTM1Q13496 603 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 TCEA2Q15560 299 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 ALG11Q2TAA5 492 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 SPACA3Q8IXA5 215 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 LZTR1Q8N653 840 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 WDR48Q8TAF3 677 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 GRAMD1AQ96CP6 724 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 IQCDQ96DY2 449 aa21.17■□□□□ 0.98
VSX1-201ENST00000376707 NAF1Q96HR8 494 aaKnown RBP21.17■□□□□ 0.98
VSX1-201ENST00000376707 GULP1Q9UBP9 304 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms