RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CACNB4O00305 520 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-204ENST00000376643 PDE2AO00408 941 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-204ENST00000376643 ZW10O43264 779 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 C6P13671 934 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 TSHRP16473 764 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 TGM2P21980 687 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 AP1S1P61966 158 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 BCL2L1Q07817 233 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 NSUN2Q08J23 767 aaKnown RBP eCLIP14.87□□□□□ -0.03
HDAC6-204ENST00000376643 CYTH1Q15438 398 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 TSR1Q2NL82 804 aaKnown RBP14.87□□□□□ -0.03
HDAC6-204ENST00000376643 C3orf38Q5JPI3 329 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 CCDC183Q5T5S1 534 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 ERMARDQ5T6L9 678 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 HID1Q8IV36 788 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 SLC35F3Q8IY50 421 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 RBFAQ8N0V3 343 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 BBS5Q8N3I7 341 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 CRELD1Q96HD1 420 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 WDR92Q96MX6 357 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 SLC46A1Q96NT5 459 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 BBC3Q96PG8 261 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-204ENST00000376643 DHX35Q9H5Z1 703 aaKnown RBP14.87□□□□□ -0.03
HDAC6-204ENST00000376643 ZWILCHQ9H900 591 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 PDFQ9HBH1 243 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 MRPL47Q9HD33 250 aaKnown RBP14.87□□□□□ -0.03
HDAC6-204ENST00000376643 SATB2Q9UPW6 733 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 TDRD6O60522 2096 aaKnown RBP14.87□□□□□ -0.03
HDAC6-204ENST00000376643 NBEAQ8NFP9 2946 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 CELSR3Q9NYQ7 3312 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 SMTNL1A8MU46 457 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 YY2O15391 372 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 GCATO75600 419 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 PIGNO95427 931 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 TNFP01375 233 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 MYBL1P10243 752 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 GZMAP12544 262 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 HSPA9P38646 679 aaKnown RBP14.86□□□□□ -0.03
HDAC6-204ENST00000376643 MMP12P39900 470 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 HCAR3P49019 387 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 SRP54P61011 504 aaKnown RBP14.86□□□□□ -0.03
HDAC6-204ENST00000376643 IL10RBQ08334 325 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 MAMLD1Q13495 774 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 C1orf61Q13536 156 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 PEX6Q13608 980 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 WSCD2Q2TBF2 565 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 TAF1BQ53T94 588 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-204ENST00000376643 LRRC73Q5JTD7 316 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 TPRG1LQ5T0D9 272 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 PLEKHA7Q6IQ23 1121 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 ENPP7Q6UWV6 458 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 RFX8Q6ZV50 586 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 TMEM159Q96B96 161 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 LIN37Q96GY3 246 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-204ENST00000376643 EXOC2Q96KP1 924 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 TMEM74Q96NL1 305 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 CCDC3Q9BQI4 270 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 APOOQ9BUR5 198 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 ASCL3Q9NQ33 180 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 MBNL1Q9NR56 388 aaKnown RBP14.86□□□□□ -0.03
HDAC6-204ENST00000376643 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.86□□□□□ -0.03
HDAC6-204ENST00000376643 SEPT3Q9UH03 358 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 ENTPD2Q9Y5L3 495 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 RAI2Q9Y5P3 530 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 DGKBQ9Y6T7 804 aa14.86□□□□□ -0.03
HDAC6-204ENST00000376643 PTPRQQ9UMZ3 2332 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-204ENST00000376643 TNFRSF10CO14798 259 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 KLK10O43240 276 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 ITGA2BP08514 1039 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 HOXC4P09017 264 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-204ENST00000376643 ELFN1P0C7U0 828 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 MYF5P13349 255 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 LIG3P49916 1009 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 PAPOLAP51003 745 aaKnown RBP14.85□□□□□ -0.03
HDAC6-204ENST00000376643 KIAA1024LP59773 190 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 ASIC2Q16515 512 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 ALG11Q2TAA5 492 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 SRLQ86TD4 932 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 NSMCE1Q8WV22 266 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 VOPP1Q96AW1 172 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 ATXN7L3BQ96GX2 97 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 ZNF599Q96NL3 588 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 GFM1Q96RP9 751 aaKnown RBP14.85□□□□□ -0.03
HDAC6-204ENST00000376643 MAGEB5Q9BZ81 275 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 KLC2Q9H0B6 622 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 SYNDIG1Q9H7V2 258 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 HAUS2Q9NVX0 235 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 GULP1Q9UBP9 304 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 GPR34Q9UPC5 381 aa14.85□□□□□ -0.03
HDAC6-204ENST00000376643 H3BRJ5 948 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 INSIG1O15503 277 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 PCCBP05166 539 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 KRT10P13645 584 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 PNLIPP16233 465 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 ARL4AP40617 200 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 VAC14Q08AM6 782 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 INPP5AQ14642 412 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 RALGPS1Q5JS13 557 aa14.84□□□□□ -0.03
HDAC6-204ENST00000376643 RD3Q7Z3Z2 195 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms