RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 HORMAD1Q86X24 394 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 TBC1D3Q8IZP1 549 aaPredicted RBP20.03■□□□□ 0.8
DDR1-228ENST00000376575 FAM71DQ8N9W8 422 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 SPATA22Q8NHS9 363 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 RBM15Q96T37 977 aaKnown RBP eCLIP20.03■□□□□ 0.8
DDR1-228ENST00000376575 GBA3Q9H227 469 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 VPS45Q9NRW7 570 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 HOMER3Q9NSC5 361 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 TMEM74BQ9NUR3 256 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 GGT7Q9UJ14 662 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 RPL26L1Q9UNX3 145 aaKnown RBP20.03■□□□□ 0.8
DDR1-228ENST00000376575 ITM2BQ9Y287 266 aa20.03■□□□□ 0.8
DDR1-228ENST00000376575 LRRK1Q38SD2 2015 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 A0A1W2PPC4 97 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 FAM47DPA6NHR8 397 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 ZNF185O15231 689 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 RNGTTO60942 597 aaKnown RBP20.02■□□□□ 0.8
DDR1-228ENST00000376575 MT-CYBP00156 380 aaPredicted RBP20.02■□□□□ 0.8
DDR1-228ENST00000376575 NUDT1P36639 197 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 DPP6P42658 865 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 RPS21P63220 83 aaKnown RBP20.02■□□□□ 0.8
DDR1-228ENST00000376575 ELP6Q0PNE2 266 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 RALGDSQ12967 914 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 LRRC73Q5JTD7 316 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 WDR45BQ5MNZ6 344 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 SYCP2LQ5T4T6 812 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 KDELC1Q6UW63 502 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 CREG2Q8IUH2 290 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 SYT12Q8IV01 421 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 CBARPQ8N350 705 aaPredicted RBP20.02■□□□□ 0.8
DDR1-228ENST00000376575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.02■□□□□ 0.8
DDR1-228ENST00000376575 CCDC110Q8TBZ0 833 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 SCRN2Q96FV2 425 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 OXNAD1Q96HP4 312 aaPredicted RBP20.02■□□□□ 0.8
DDR1-228ENST00000376575 FEM1CQ96JP0 617 aa20.02■□□□□ 0.8
DDR1-228ENST00000376575 NAP1L3Q99457 506 aaPredicted RBP20.02■□□□□ 0.8
DDR1-228ENST00000376575 FAM186AA6NE01 2351 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 LOC285095A0A1B0GVY8 99 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 A0A1W2PQU0 124 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 PGRMC1O00264 195 aaKnown RBP20.01■□□□□ 0.79
DDR1-228ENST00000376575 CPP00450 1065 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 EPOP01588 193 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 TGM1P22735 817 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 CA4P22748 312 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 CD27P26842 260 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 P3H1Q32P28 736 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 CFAP58Q5T655 872 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 SEL1L3Q68CR1 1132 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 ITPRIPL1Q6GPH6 555 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 DPPA4Q7L190 304 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 ARMCX6Q7L4S7 300 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 C12orf50Q8NA57 414 aaPredicted RBP20.01■□□□□ 0.79
DDR1-228ENST00000376575 ASB12Q8WXK4 309 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 LYSMD1Q96S90 227 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 C1QTNF2Q9BXJ5 285 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 PCDH9Q9HC56 1237 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 FAM153AQ9UHL3 310 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 CHKBQ9Y259 395 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 SAR1BQ9Y6B6 198 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 SLCO1B1Q9Y6L6 691 aa20.01■□□□□ 0.79
DDR1-228ENST00000376575 RALGAPA1Q6GYQ0 2036 aa20■□□□□ 0.79
DDR1-228ENST00000376575 A0A0J9YYE9 177 aa20■□□□□ 0.79
DDR1-228ENST00000376575 LRP3O75074 770 aa20■□□□□ 0.79
DDR1-228ENST00000376575 STK10O94804 968 aaKnown RBP20■□□□□ 0.79
DDR1-228ENST00000376575 FSBPO95073 299 aa20■□□□□ 0.79
DDR1-228ENST00000376575 PCDH8O95206 1070 aa20■□□□□ 0.79
DDR1-228ENST00000376575 TRBC1P01850 177 aa20■□□□□ 0.79
DDR1-228ENST00000376575 PRKCGP05129 697 aa20■□□□□ 0.79
DDR1-228ENST00000376575 MAOBP27338 520 aa20■□□□□ 0.79
DDR1-228ENST00000376575 CREB5Q02930 508 aa20■□□□□ 0.79
DDR1-228ENST00000376575 MPP3Q13368 585 aa20■□□□□ 0.79
DDR1-228ENST00000376575 FGL2Q14314 439 aa20■□□□□ 0.79
DDR1-228ENST00000376575 AGERQ15109 404 aa20■□□□□ 0.79
DDR1-228ENST00000376575 ERAP2Q6P179 960 aa20■□□□□ 0.79
DDR1-228ENST00000376575 CYP2U1Q7Z449 544 aa20■□□□□ 0.79
DDR1-228ENST00000376575 PDCD6IPQ8WUM4 868 aaKnown RBP20■□□□□ 0.79
DDR1-228ENST00000376575 MRGPRX2Q96LB1 330 aa20■□□□□ 0.79
DDR1-228ENST00000376575 ARRDC1-AS1Q9H2J1 176 aa20■□□□□ 0.79
DDR1-228ENST00000376575 SMARCAL1Q9NZC9 954 aa20■□□□□ 0.79
DDR1-228ENST00000376575 RSPH14Q9UHP6 348 aa20■□□□□ 0.79
DDR1-228ENST00000376575 EIF2B4Q9UI10 523 aaKnown RBP20■□□□□ 0.79
DDR1-228ENST00000376575 ZNF148Q9UQR1 794 aa20■□□□□ 0.79
DDR1-228ENST00000376575 DMTF1Q9Y222 760 aa20■□□□□ 0.79
DDR1-228ENST00000376575 PLXNA2O75051 1894 aa20■□□□□ 0.79
DDR1-228ENST00000376575 LAMA1P25391 3075 aa20■□□□□ 0.79
DDR1-228ENST00000376575 MEI4A8MW99 385 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 ANKRD66B4E2M5 251 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 XPAP23025 273 aaPredicted RBP19.99■□□□□ 0.79
DDR1-228ENST00000376575 MPLP40238 635 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 CDK18Q07002 472 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 SNX1Q13596 522 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 CDKN3Q16667 212 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 QPCTQ16769 361 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 PARP6Q2NL67 630 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 RUBCNQ92622 972 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 TRIM44Q96DX7 344 aaPredicted RBP19.99■□□□□ 0.79
DDR1-228ENST00000376575 LENG8Q96PV6 779 aaPredicted RBP19.99■□□□□ 0.79
DDR1-228ENST00000376575 MLPHQ9BV36 600 aaPredicted RBP19.99■□□□□ 0.79
DDR1-228ENST00000376575 B4GALT6Q9UBX8 382 aa19.99■□□□□ 0.79
DDR1-228ENST00000376575 GMEB2Q9UKD1 530 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms