RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 CTGFP29279 349 aa11.75□□□□□ -0.53
DDR1-227ENST00000376570 SLC11A2P49281 568 aa11.75□□□□□ -0.53
DDR1-227ENST00000376570 ARHGEF7Q14155 803 aa11.75□□□□□ -0.53
DDR1-227ENST00000376570 TXNDC8Q6A555 127 aa11.75□□□□□ -0.53
DDR1-227ENST00000376570 PKN3Q6P5Z2 889 aa11.75□□□□□ -0.53
DDR1-227ENST00000376570 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
DDR1-227ENST00000376570 TMEM173Q86WV6 379 aaPredicted RBP11.75□□□□□ -0.53
DDR1-227ENST00000376570 C2orf73Q8N5S3 287 aaPredicted RBP11.75□□□□□ -0.53
DDR1-227ENST00000376570 PHF12Q96QT6 1004 aa11.75□□□□□ -0.53
DDR1-227ENST00000376570 TLE6Q9H808 572 aa11.75□□□□□ -0.53
DDR1-227ENST00000376570 TRPM5Q9NZQ8 1165 aa11.75□□□□□ -0.53
DDR1-227ENST00000376570 ZNF839A8K0R7 811 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 MTSS1O43312 755 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 CCNT2O60583 730 aaKnown RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 RAB10P61026 200 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 GRIK3Q13003 919 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 FASTKQ14296 549 aaKnown RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 PCLAFQ15004 111 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 DNAL1Q4LDG9 190 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 DCLRE1AQ6PJP8 1040 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 KYAT3Q6YP21 454 aaKnown RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 TDRPQ86YL5 185 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 TRIML2Q8N7C3 387 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 CYGBQ8WWM9 190 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 LRRC39Q96DD0 335 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 CAPNS2Q96L46 248 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 MARCH4Q9P2E8 410 aaPredicted RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 KANSL3Q9P2N6 904 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 FAM159BA6NKW6 160 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 ADAM12O43184 909 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 UGT1A6P19224 532 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 TPSB2P20231 275 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 UGT1A1P22309 533 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 UGT1A4P22310 534 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 NFKBIAP25963 317 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 PEX2P28328 305 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 HOXD10P28358 340 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 UGT1A3P35503 534 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 UGT1A5P35504 534 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 CCNFP41002 786 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 CYP4F8P98187 520 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 POU4F1Q01851 419 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 KLF10Q13118 480 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 TPSAB1Q15661 275 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 DEFB115Q30KQ5 88 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 SLC24A5Q71RS6 500 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 ZNF534Q76KX8 674 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 ANKLE1Q8NAG6 615 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 OR10Q1Q8NGQ4 319 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 CXorf38Q8TB03 319 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 SERPINI1Q99574 410 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 PPCSQ9HAB8 311 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 OLA1Q9NTK5 396 aaKnown RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 EPS15L1Q9UBC2 864 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 SUN2Q9UH99 717 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 CRLS1Q9UJA2 301 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 CKBP12277 381 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 PIK3R1P27986 724 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 ATP5C1P36542 298 aaKnown RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 CDKN1CP49918 316 aaPredicted RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 LIMK2P53671 638 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 HSPA14Q0VDF9 509 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 WASHC2DQ5SRD0 308 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 BNC2Q6ZN30 1099 aaPredicted RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 CORO1BQ9BR76 489 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 SAR1AQ9NR31 198 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 EVLQ9UI08 416 aaPredicted RBP11.74□□□□□ -0.53
DDR1-227ENST00000376570 ADAM28Q9UKQ2 775 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 TRHDEQ9UKU6 1024 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 SH3BP1Q9Y3L3 701 aa11.74□□□□□ -0.53
DDR1-227ENST00000376570 A0A0U1RQF3 1178 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 ARHGEF37A1IGU5 675 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 UPK3BL1B0FP48 263 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 UPK3BL2E5RIL1 263 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 KCNE1P15382 129 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 CORO1AP31146 461 aaKnown RBP11.73□□□□□ -0.53
DDR1-227ENST00000376570 CBX2Q14781 532 aaPredicted RBP11.73□□□□□ -0.53
DDR1-227ENST00000376570 FUT10Q6P4F1 479 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDR1-227ENST00000376570 ARNTL2Q8WYA1 636 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 NSUN5Q96P11 429 aaKnown RBP11.73□□□□□ -0.53
DDR1-227ENST00000376570 WDR6Q9NNW5 1121 aaKnown RBP11.73□□□□□ -0.53
DDR1-227ENST00000376570 OSER1Q9NX31 292 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 GDAP2Q9NXN4 497 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 MID2Q9UJV3 735 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 CCDC189A1A4V9 331 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 GSTA4O15217 222 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 HNRNPCP07910 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDR1-227ENST00000376570 GRK2P25098 689 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 HMOX2P30519 316 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 NPY2RP49146 381 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 PAOXQ6QHF9 649 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 C11orf74Q86VG3 221 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 KYQ8NBH2 561 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 GANCQ8TET4 914 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 ACBD6Q9BR61 282 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 NFKBIZQ9BYH8 718 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 WDR41Q9HAD4 459 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 GMPR2Q9P2T1 348 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms