RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 CDKL1Q00532 357 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 NFKB2Q00653 900 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 RHDQ02161 417 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 MAPRE2Q15555 327 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 AGAP9Q5VTM2 703 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 FAM45BPQ6NSW5 357 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 SCD5Q86SK9 330 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 OR13J1Q8NGT2 312 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 FAM45AQ8TCE6 357 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 CALML6Q8TD86 181 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 CASP10Q92851 521 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 SIK2Q9H0K1 926 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 GSTO2Q9H4Y5 243 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 TMEM181Q9P2C4 612 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 DSEQ9UL01 958 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 CASTOR2A6NHX0 329 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 E9PAM4 449 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 CFLARO15519 480 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 TNFAIP8O95379 198 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 CHRNA1P02708 482 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 MMP2P08253 660 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 HNRNPLP14866 589 aaKnown RBP eCLIP10.74□□□□□ -0.69
ABCF1-202ENST00000376545 IMPDH1P20839 514 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 WNT3AP56704 352 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 MGAT5BQ3V5L5 792 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 ZNF280DQ6N043 979 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 BORAQ6PGQ7 559 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 LARP4Q71RC2 724 aaKnown RBP eCLIP10.74□□□□□ -0.694e-8■■■□□ 16.7
ABCF1-202ENST00000376545 CUZD1Q86UP6 607 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 SLC22A9Q8IVM8 553 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 UMODL1-AS1Q8N2C9 162 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 METTL25Q8N6Q8 603 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 SLCO4A1Q96BD0 722 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 ZFRQ96KR1 1074 aaKnown RBP10.74□□□□□ -0.69
ABCF1-202ENST00000376545 ZNF597Q96LX8 424 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 TRMOQ9BU70 441 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 LZTS1Q9Y250 596 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 HS3ST4Q9Y661 456 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 ANKRD36A6QL64 1941 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 E7ENX8 843 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 TXNDC9O14530 226 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 UBFD1O14562 309 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 ACADVLP49748 655 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 MLLT6P55198 1093 aaPredicted RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 CSHL1Q14406 222 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 IHHQ14623 411 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 UGT3A2Q3SY77 523 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 IL23RQ5VWK5 629 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 REP15Q6BDI9 236 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 C14orf80Q86SX3 495 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 CILP2Q8IUL8 1156 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 TEX26Q8N6G2 289 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 SLC39A13Q96H72 371 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 TMEM209Q96SK2 561 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 FSD1LQ9BXM9 530 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 SLC7A4O43246 635 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 PMPCBO75439 489 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 OR6B1O95007 311 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 NDST2P52849 883 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 TXNL4AP83876 142 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 ILF2Q12905 390 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 MAPRE1Q15691 268 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 FSCN1Q16658 493 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 SPRYD7Q5W111 196 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 PAOXQ6QHF9 649 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 TMEM207Q6UWW9 146 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 METTL23Q86XA0 190 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 CHERPQ8IWX8 916 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 RNF148Q8N7C7 305 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 ANKRD49Q8WVL7 239 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 TMA16Q96EY4 203 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 TSPAN17Q96FV3 270 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 AP5M1Q9H0R1 490 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 MFSD1Q9H3U5 465 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 PRDM5Q9NQX1 630 aaPredicted RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 VPS45Q9NRW7 570 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 GBF1Q92538 1859 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 PSMD12O00232 456 aaPredicted RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 UBDO15205 165 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 RGS2P41220 211 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 SERPINH1P50454 418 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 SLC5A3P53794 718 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 ACVR1Q04771 509 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 GK3PQ14409 553 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 C6orf10Q5SRN2 563 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 HECTD2Q5U5R9 776 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 RIN3Q8TB24 985 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 GTSE1Q9NYZ3 720 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 SFMBT1Q9UHJ3 866 aa10.73□□□□□ -0.69
ABCF1-202ENST00000376545 IPO11Q9UI26 975 aaKnown RBP10.73□□□□□ -0.69
ABCF1-202ENST00000376545 PRORSD1PA6NEY8 169 aa10.72□□□□□ -0.69
ABCF1-202ENST00000376545 PDLIM1O00151 329 aa10.72□□□□□ -0.69
ABCF1-202ENST00000376545 PGM3O95394 542 aa10.72□□□□□ -0.69
ABCF1-202ENST00000376545 S1PR4O95977 384 aa10.72□□□□□ -0.69
ABCF1-202ENST00000376545 CLPTM1O96005 669 aa10.72□□□□□ -0.69
ABCF1-202ENST00000376545 BRCC3P46736 316 aa10.72□□□□□ -0.69
ABCF1-202ENST00000376545 SLC12A2P55011 1212 aa10.72□□□□□ -0.69
ABCF1-202ENST00000376545 FASTKQ14296 549 aaKnown RBP10.72□□□□□ -0.69
ABCF1-202ENST00000376545 CCL14Q16627 93 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms