RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CTPS1P17812 591 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 GLRBP48167 497 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 USP10Q14694 798 aaKnown RBP12.68□□□□□ -0.38
CLCN6-206ENST00000376496 MPPE1Q53F39 396 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 ALG1LQ6GMV1 187 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 KIAA0930Q6ICG6 404 aaPredicted RBP12.68□□□□□ -0.38
CLCN6-206ENST00000376496 RAPH1Q70E73 1250 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 MDGA1Q8NFP4 955 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 NKX2-4Q9H2Z4 354 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 IGFLR1Q9H665 355 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 BPIFA1Q9NP55 256 aa12.68□□□□□ -0.38
CLCN6-206ENST00000376496 MROH6A6NGR9 719 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 A8MX80 341 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 EDF1O60869 148 aaKnown RBP12.67□□□□□ -0.38
CLCN6-206ENST00000376496 EPHA5P54756 1037 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 PRAMEP78395 509 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 UBE3AQ05086 875 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 CHI3L2Q15782 390 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 PRSS36Q5K4E3 855 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 TRIM68Q6AZZ1 485 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 RYBPQ8N488 228 aaPredicted RBP12.67□□□□□ -0.38
CLCN6-206ENST00000376496 VN1R2Q8NFZ6 395 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 RMDN2Q96LZ7 410 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 BBS2Q9BXC9 721 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 NPHS2Q9NP85 383 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 ABCF3Q9NUQ8 709 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 CPSF2Q9P2I0 782 aaKnown RBP12.67□□□□□ -0.38
CLCN6-206ENST00000376496 MRPS23Q9Y3D9 190 aaKnown RBP12.67□□□□□ -0.38
CLCN6-206ENST00000376496 RWDD3Q9Y3V2 267 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 PCDHB9Q9Y5E1 797 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 CCDC162PA2VCL2 907 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 GSRP00390 522 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 FGF1P05230 155 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 ALPIP09923 528 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 PAMP19021 973 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 HLA-DPA1P20036 260 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 VIPR2P41587 438 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 SERPINB8P50452 374 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 FRG1Q14331 258 aaKnown RBP12.67□□□□□ -0.38
CLCN6-206ENST00000376496 SEMA3AQ14563 771 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 PLEKHG6Q3KR16 790 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 LY6G5CQ5SRR4 150 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 C6orf89Q6UWU4 347 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
CLCN6-206ENST00000376496 ELMO2Q96JJ3 720 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 NUDCD1Q96RS6 583 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 PBX4Q9BYU1 374 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 C20orf27Q9GZN8 174 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 RHOJQ9H4E5 214 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 TLE6Q9H808 572 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 MRM3Q9HC36 420 aaKnown RBP12.67□□□□□ -0.38
CLCN6-206ENST00000376496 DCTN4Q9UJW0 460 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 CRYL1Q9Y2S2 319 aa12.67□□□□□ -0.38
CLCN6-206ENST00000376496 USP15Q9Y4E8 981 aaPredicted RBP12.67□□□□□ -0.38
CLCN6-206ENST00000376496 HELZP42694 1942 aaKnown RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 FAM95CA0A1B0GW59 222 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 GPR39O43194 453 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 GOT2P00505 430 aaKnown RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 FUT11Q495W5 492 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 ARHGAP15Q53QZ3 475 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 NUDCD3Q8IVD9 361 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 CPXM2Q8N436 756 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 DCAF4L2Q8NA75 395 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 NAT14Q8WUY8 206 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 PTCD2Q8WV60 388 aaKnown RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 KCTD4Q8WVF5 259 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 SORCS1Q8WY21 1168 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 RSPRY1Q96DX4 576 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 PRKD2Q9BZL6 878 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 PLIN3O60664 434 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 XYLBO75191 536 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 CDKN1CP49918 316 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 BST1Q10588 318 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 RFTN1Q14699 578 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 DGKKQ5KSL6 1271 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 NCEH1Q6PIU2 408 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 CCDC117Q8IWD4 279 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 PAF1Q8N7H5 531 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 C2CD4AQ8NCU7 369 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 OR4K2Q8NGD2 314 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 RFWD2Q8NHY2 731 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 ZFYVE19Q96K21 471 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 GPR22Q99680 433 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 C2orf49Q9BVC5 232 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 FAM96AQ9H5X1 160 aa12.66□□□□□ -0.38
CLCN6-206ENST00000376496 MARCOQ9UEW3 520 aaPredicted RBP12.66□□□□□ -0.38
CLCN6-206ENST00000376496 ATG2AQ2TAZ0 1938 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 TIMM44O43615 452 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 LYPLA1O75608 230 aaPredicted RBP12.65□□□□□ -0.38
CLCN6-206ENST00000376496 RB1P06400 928 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 TAS2R39P59534 338 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 FASTKD1Q53R41 847 aaKnown RBP12.65□□□□□ -0.38
CLCN6-206ENST00000376496 TCEAL5Q5H9L2 206 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 PITRM1Q5JRX3 1037 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 ZNF449Q6P9G9 518 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 GLT6D1Q7Z4J2 308 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 CNTN4Q8IWV2 1026 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 FIBINQ8TAL6 211 aa12.65□□□□□ -0.38
CLCN6-206ENST00000376496 RANBP9Q96S59 729 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms