RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 MAPKAPK3Q16644 382 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 SOWAHAQ2M3V2 549 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 SH3PXD2AQ5TCZ1 1133 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 DTNBP1Q96EV8 351 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 PPP3R2Q96LZ3 170 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 BBS4Q96RK4 519 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 USE1Q9NZ43 259 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 HMGXB4Q9UGU5 601 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 ANKDD1BA6NHY2 528 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 RGS5O15539 181 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
C9orf47-203ENST00000375851 ATG7O95352 703 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 CDC25CP30307 473 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 GRIA3P42263 894 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 RBFAQ8N0V3 343 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.22
C9orf47-203ENST00000375851 RCN3Q96D15 328 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 SLC9A7Q96T83 725 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 GBA3Q9H227 469 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 RERGLQ9H628 205 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 ADPRHL2Q9NX46 363 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 LEF1Q9UJU2 399 aaPredicted RBP13.69□□□□□ -0.22
C9orf47-203ENST00000375851 ANAPC2Q9UJX6 822 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 PRR5-ARHGAP8B1AHC4 643 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 MAP3K13O43283 966 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 DYRK3O43781 588 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 HS6ST1O60243 411 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 EPN2O95208 641 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 GLUD1P00367 558 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 TACR2P21452 398 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 HPCAL1P37235 193 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 ARHGAP8P85298 464 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 EIF2B5Q13144 721 aaKnown RBP13.69□□□□□ -0.22
C9orf47-203ENST00000375851 CPSF6Q16630 551 aaKnown RBP eCLIP13.69□□□□□ -0.22
C9orf47-203ENST00000375851 PHKG1Q16816 387 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 RAET1GQ6H3X3 334 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 NET1Q7Z628 596 aaPredicted RBP13.69□□□□□ -0.22
C9orf47-203ENST00000375851 EFCAB3Q8N7B9 438 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 CXorf40AQ8TE69 158 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 LRMDAQ9H2I8 198 aa13.69□□□□□ -0.22
C9orf47-203ENST00000375851 MTF2Q9Y483 593 aaPredicted RBP13.69□□□□□ -0.22
C9orf47-203ENST00000375851 ARHGEF9O43307 516 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 OTCP00480 354 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
C9orf47-203ENST00000375851 CES5AQ6NT32 575 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 ZNF438Q7Z4V0 828 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 TRMOQ9BU70 441 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 CDH19Q9H159 772 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 KIAA1522Q9P206 1035 aaPredicted RBP13.68□□□□□ -0.22
C9orf47-203ENST00000375851 CFAP97Q9P2B7 532 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 SLC12A4Q9UP95 1085 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 MYH2Q9UKX2 1941 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 FAM220BPB1ANY3 271 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 KRT36O76013 467 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 NDST3O95803 873 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 HTR7P34969 479 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 BLVRAP53004 296 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 RABGGTBP53611 331 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 RPS7P62081 194 aaKnown RBP13.68□□□□□ -0.22
C9orf47-203ENST00000375851 CYP1B1Q16678 543 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 FBXO30Q8TB52 745 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 CLEC4CQ8WTT0 213 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 GLMNQ92990 594 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 LPIN3Q9BQK8 851 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 ZNF839A8K0R7 811 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
C9orf47-203ENST00000375851 KCNH1O95259 989 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 TNFAIP8O95379 198 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 CENPAP49450 140 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 THOP1P52888 689 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 GDF10P55107 478 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 DSC2Q02487 901 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 CCL14Q16627 93 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 CA9Q16790 459 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 PPM1JQ5JR12 505 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 ATAD3BQ5T9A4 648 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 TXNDC11Q6PKC3 985 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 DBF4BQ8NFT6 615 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 SPOCK2Q92563 424 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 TMEM245Q9H330 911 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 WDR55Q9H6Y2 383 aaPredicted RBP13.68□□□□□ -0.22
C9orf47-203ENST00000375851 SPAG4Q9NPE6 437 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 DTLQ9NZJ0 730 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 COPG2Q9UBF2 871 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 TRAF6Q9Y4K3 522 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 SNX10Q9Y5X0 201 aa13.68□□□□□ -0.22
C9orf47-203ENST00000375851 QSOX1O00391 747 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 TRAFD1O14545 582 aaPredicted RBP13.67□□□□□ -0.22
C9orf47-203ENST00000375851 MAGEC1O60732 1142 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 LGR5O75473 907 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 RECQL5O94762 991 aaPredicted RBP13.67□□□□□ -0.22
C9orf47-203ENST00000375851 LAG3P18627 525 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 HOXD13P35453 343 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 GSSP48637 474 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 HK2P52789 917 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 RPL38P63173 70 aaKnown RBP13.67□□□□□ -0.22
C9orf47-203ENST00000375851 NRF1Q16656 503 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 LYPLAL1Q5VWZ2 237 aa13.67□□□□□ -0.22
C9orf47-203ENST00000375851 SLC39A4Q6P5W5 647 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms