RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 POMCP01189 267 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 NDUFV1P49821 464 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 KPNA1P52294 538 aaPredicted RBP13.02□□□□□ -0.33
MSH5-204ENST00000375755 MAPK10P53779 464 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 MGAT3Q09327 533 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 TAF2Q6P1X5 1199 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 AGMOQ6ZNB7 445 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 NANOGNBQ7Z5D8 188 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 CLEC14AQ86T13 490 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 NETO2Q8NC67 525 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 CD99L2Q8TCZ2 262 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 ISL2Q96A47 359 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 RHOBTB2Q9BYZ6 727 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 DRC3Q9H069 523 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 SNX25Q9H3E2 840 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 POLR1BQ9H9Y6 1135 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 NMRAL1Q9HBL8 299 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 NCKIPSDQ9NZQ3 722 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 PADI3Q9ULW8 664 aa13.02□□□□□ -0.33
MSH5-204ENST00000375755 GPC6Q9Y625 555 aaPredicted RBP13.02□□□□□ -0.33
MSH5-204ENST00000375755 ARL5CA6NH57 179 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 ZNF839A8K0R7 811 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 OXSR1O95747 527 aaPredicted RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 ZNF182P17025 639 aaPredicted RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 CYP2F1P24903 491 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 GRIA4P48058 902 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 PITX1P78337 314 aaPredicted RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 HTRA3P83110 453 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 GNA12Q03113 381 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 NME3Q13232 169 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 ANKFN1Q8N957 763 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 CASP10Q92851 521 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 MUC3BQ9H195 1237 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 UPF3AQ9H1J1 476 aaKnown RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 TRIM64BA6NI03 449 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 M0QZ92 97 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 TK2O00142 265 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 TRIM24O15164 1050 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 CLASP2O75122 1294 aaKnown RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 CLIC3O95833 236 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 CD4P01730 458 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 HDCP19113 662 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 MYF6P23409 242 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 RPS3AP61247 264 aaKnown RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 RGS21Q2M5E4 152 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 BOLA3Q53S33 107 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 GRTP1Q5TC63 336 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 CCSAPQ6IQ19 270 aaPredicted RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 PAQR9Q6ZVX9 377 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 SCAIQ8N9R8 606 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 ACVR1CQ8NER5 493 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 C17orf50Q8WW18 174 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 SREK1Q8WXA9 508 aaKnown RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 ACDQ96AP0 544 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 FCRL3Q96P31 734 aaPredicted RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 RBBP8Q99708 897 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 CPNE1Q99829 537 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 TMEM30AQ9NV96 361 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 GMPR2Q9P2T1 348 aaKnown RBP13.01□□□□□ -0.33
MSH5-204ENST00000375755 ERGIC3Q9Y282 383 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 TMEM98Q9Y2Y6 226 aa13.01□□□□□ -0.33
MSH5-204ENST00000375755 NRP1O14786 923 aa13□□□□□ -0.33
MSH5-204ENST00000375755 C2P06681 752 aa13□□□□□ -0.33
MSH5-204ENST00000375755 MLNP12872 115 aa13□□□□□ -0.33
MSH5-204ENST00000375755 PSMD8P48556 350 aa13□□□□□ -0.33
MSH5-204ENST00000375755 SLC6A3Q01959 620 aa13□□□□□ -0.33
MSH5-204ENST00000375755 TRAF2Q12933 501 aa13□□□□□ -0.33
MSH5-204ENST00000375755 ITGADQ13349 1161 aa13□□□□□ -0.33
MSH5-204ENST00000375755 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.338e-7■■■■□ 25
MSH5-204ENST00000375755 STRA8Q7Z7C7 330 aa13□□□□□ -0.33
MSH5-204ENST00000375755 ZC3H7AQ8IWR0 971 aaKnown RBP13□□□□□ -0.33
MSH5-204ENST00000375755 CBR4Q8N4T8 237 aa13□□□□□ -0.33
MSH5-204ENST00000375755 TNIP2Q8NFZ5 429 aa13□□□□□ -0.33
MSH5-204ENST00000375755 SLC7A14Q8TBB6 771 aa13□□□□□ -0.33
MSH5-204ENST00000375755 CERS2Q96G23 380 aa13□□□□□ -0.33
MSH5-204ENST00000375755 UNC93B1Q9H1C4 597 aa13□□□□□ -0.33
MSH5-204ENST00000375755 GID8Q9NWU2 228 aa13□□□□□ -0.33
MSH5-204ENST00000375755 GDAP2Q9NXN4 497 aa13□□□□□ -0.33
MSH5-204ENST00000375755 HESX1Q9UBX0 185 aa13□□□□□ -0.33
MSH5-204ENST00000375755 MFHAS1Q9Y4C4 1052 aa13□□□□□ -0.33
MSH5-204ENST00000375755 HEATR9A2RTY3 570 aa13□□□□□ -0.33
MSH5-204ENST00000375755 TMEM233B4DJY2 109 aa13□□□□□ -0.33
MSH5-204ENST00000375755 NDUFB5O43674 189 aa13□□□□□ -0.33
MSH5-204ENST00000375755 HUS1O60921 280 aa13□□□□□ -0.33
MSH5-204ENST00000375755 H2AFYO75367 372 aaKnown RBP13□□□□□ -0.33
MSH5-204ENST00000375755 MYCP01106 439 aaPredicted RBP13□□□□□ -0.33
MSH5-204ENST00000375755 PGGT1BP53609 377 aa13□□□□□ -0.33
MSH5-204ENST00000375755 NAGLUP54802 743 aa13□□□□□ -0.33
MSH5-204ENST00000375755 SP3Q02447 781 aa13□□□□□ -0.33
MSH5-204ENST00000375755 C6orf10Q5SRN2 563 aa13□□□□□ -0.33
MSH5-204ENST00000375755 LSMEM2Q8N112 164 aa13□□□□□ -0.33
MSH5-204ENST00000375755 TOP1MTQ969P6 601 aa13□□□□□ -0.33
MSH5-204ENST00000375755 DUS3LQ96G46 650 aaKnown RBP13□□□□□ -0.33
MSH5-204ENST00000375755 QKIQ96PU8 341 aaKnown RBP eCLIP13□□□□□ -0.33
MSH5-204ENST00000375755 AGAP2Q99490 1192 aa13□□□□□ -0.33
MSH5-204ENST00000375755 ADI1Q9BV57 179 aa13□□□□□ -0.33
MSH5-204ENST00000375755 PALMDQ9NP74 551 aa13□□□□□ -0.33
MSH5-204ENST00000375755 UTP6Q9NYH9 597 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms