RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 KIAA1257Q9ULG3 409 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 SMIM31A0A1B0GVY4 71 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 TRIM38O00635 465 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 SBK3P0C264 359 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 HGFP14210 728 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 SMPD1P17405 629 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 ADSLP30566 484 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-202ENST00000375597 IREB2P48200 963 aaKnown RBP11.86□□□□□ -0.51
MCF2L-202ENST00000375597 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 BFSP2Q13515 415 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 DCTN2Q13561 401 aaKnown RBP11.86□□□□□ -0.51
MCF2L-202ENST00000375597 IKBKEQ14164 716 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 RBBP7Q16576 425 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 AAK1Q2M2I8 961 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 BTBD8Q5XKL5 378 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 DRAXINQ8NBI3 349 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-202ENST00000375597 MTMR14Q8NCE2 650 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 SGCDQ92629 289 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 RTP4Q96DX8 246 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 ITCHQ96J02 903 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 SNX27Q96L92 541 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 TBATAQ96M53 351 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 NAT9Q9BTE0 207 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 EFHD1Q9BUP0 239 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 DUSP16Q9BY84 665 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 CRTAC1Q9NQ79 661 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 PRDM8Q9NQV8 689 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 SORCS3Q9UPU3 1222 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 COL2A1P02458 1487 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 IGKV6-21A0A0C4DH24 114 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 A0A0J9YYE9 177 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 A0A1W2PQ67 120 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 J3KR12 359 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 HLA-DQB2P05538 268 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 SNRPB2P08579 225 aaKnown RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 SETSIPP0DME0 302 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 GLDCP23378 1020 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 MAP4P27816 1152 aaKnown RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 NFYCQ13952 458 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 KLHL35Q6PF15 583 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 CCDC81Q6ZN84 652 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 CHSY3Q70JA7 882 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ELMO1Q92556 727 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 PBXIP1Q96AQ6 731 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ZNF419Q96HQ0 510 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 SLC39A8Q9C0K1 460 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 IL22Q9GZX6 179 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ALG2Q9H553 416 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 CACNA2D2Q9NY47 1150 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 MARCH4Q9P2E8 410 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 TRAF6Q9Y4K3 522 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 IPPQ9Y573 584 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 A8MT66 165 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 GNGT2O14610 69 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ARSDP51689 593 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 WNT3AP56704 352 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 GHRHRQ02643 423 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 TRIM25Q14258 630 aaKnown RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 OTUD1Q5VV17 481 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 TIFABQ6ZNK6 161 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ZNF410Q86VK4 478 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 CLHC1Q8NHS4 586 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 FBXO30Q8TB52 745 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 RMDN1Q96DB5 314 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 FCRL2Q96LA5 508 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ZNF560Q96MR9 790 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 PLEKHG4BQ96PX9 1271 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 SMOQ99835 787 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 GBA3Q9H227 469 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 MROH8Q9H579 483 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 SPAG4Q9NPE6 437 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 RGS18Q9NS28 235 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 HSFX1Q9UBD0 423 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 AFF4Q9UHB7 1163 aaKnown RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 VPS4AQ9UN37 437 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 KNL1Q8NG31 2342 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 MYO7AQ13402 2215 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 PIP5K1BO14986 540 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 NOL3O60936 208 aaKnown RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 CABYRO75952 493 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 GUCA1CO95843 209 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ZNF182P17025 639 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 FMO4P31512 558 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 GRM5P41594 1212 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 CREB5Q02930 508 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 EFEMP1Q12805 493 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 DGCR6Q14129 220 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ZNF484Q5JVG2 852 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 KDM1BQ8NB78 822 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 RIN3Q8TB24 985 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 NCLNQ969V3 563 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 MRPS26Q9BYN8 205 aaKnown RBP11.85□□□□□ -0.51
MCF2L-202ENST00000375597 SP110Q9HB58 689 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 RNF181Q9P0P0 153 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ADAMTS5Q9UNA0 930 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 ARL5AQ9Y689 179 aa11.85□□□□□ -0.51
MCF2L-202ENST00000375597 A0A1B0GTL3 188 aa11.84□□□□□ -0.51
MCF2L-202ENST00000375597 FBP2O00757 339 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms