RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 OR2T34Q8NGX1 318 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 OR2T3Q8NH03 318 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
CUL4A-203ENST00000375441 STYXQ8WUJ0 223 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 TINF2Q9BSI4 451 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 C17orf80Q9BSJ5 609 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 THUMPD3Q9BV44 507 aaKnown RBP13.22□□□□□ -0.29
CUL4A-203ENST00000375441 PREBQ9HCU5 417 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 C16orf96A6NNT2 1141 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 FGF10O15520 208 aaPredicted RBP13.22□□□□□ -0.29
CUL4A-203ENST00000375441 RNASEH2AO75792 299 aaKnown RBP13.22□□□□□ -0.29
CUL4A-203ENST00000375441 ASLP04424 464 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 LINC00032P0C843 101 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 CYP2C18P33260 490 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 PSEN2P49810 448 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 CDH15P55291 814 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 DUSP28Q4G0W2 176 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 C10orf120Q5SQS8 335 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 FOXB2Q5VYV0 432 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 TLK2Q86UE8 772 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 OR9I1Q8NGQ6 314 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 LZICQ8WZA0 190 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 CENPIQ92674 756 aaPredicted RBP13.22□□□□□ -0.29
CUL4A-203ENST00000375441 NTAN1Q96AB6 310 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 SYT17Q9BSW7 474 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 SYTL2Q9HCH5 934 aa13.22□□□□□ -0.29
CUL4A-203ENST00000375441 WNK3Q9BYP7 1800 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 ZCWPW2A0A1B0GU75 182 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 KLHL33A6NCF5 533 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 CPT1AP50416 773 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 HUNKP57058 714 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 CHRNB3Q05901 458 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 LPIN1Q14693 890 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 ZIK1Q3SY52 487 aaPredicted RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 KCTD21Q4G0X4 260 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 ZRANB3Q5FWF4 1079 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 GPR107Q5VW38 600 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 CCDC117Q8IWD4 279 aaPredicted RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 CDC26Q8NHZ8 85 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 KHSRPQ92945 711 aaKnown RBP eCLIP13.21□□□□□ -0.298e-7■■■■□ 20.3
CUL4A-203ENST00000375441 C19orf60Q96EN9 201 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 NSMCE2Q96MF7 247 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 MLPHQ9BV36 600 aaPredicted RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 LIN28AQ9H9Z2 209 aaKnown RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 TIMMDC1Q9NPL8 285 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 NDFIP2Q9NV92 336 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 HACD3Q9P035 362 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 ADCY6O43306 1168 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 WARSP23381 471 aaKnown RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 CCNCP24863 283 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 HNRNPDQ14103 355 aaKnown RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 SGO1Q5FBB7 561 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 CCDC97Q96F63 343 aaPredicted RBP13.21□□□□□ -0.29
CUL4A-203ENST00000375441 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 PTCH2Q9Y6C5 1203 aa13.21□□□□□ -0.29
CUL4A-203ENST00000375441 CCDC154A6NI56 674 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 AZIN1O14977 448 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 TBC1D4O60343 1298 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 TSPAN3O60637 253 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 MT-ND1P03886 318 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 FBXO48Q5FWF7 155 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 SMYD5Q6GMV2 418 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 EFL1Q7Z2Z2 1120 aaKnown RBP13.21□□□□□ -0.3
CUL4A-203ENST00000375441 STK32CQ86UX6 486 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 CANT1Q8WVQ1 401 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 ANAPC2Q9UJX6 822 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 SLC8A2Q9UPR5 921 aa13.21□□□□□ -0.3
CUL4A-203ENST00000375441 PRG3Q9Y2Y8 225 aaPredicted RBP13.21□□□□□ -0.3
CUL4A-203ENST00000375441 DCLK1O15075 740 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 TREHO43280 583 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 SMPD1P17405 629 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 GLDCP23378 1020 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 YWHAQP27348 245 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 CA8P35219 290 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 ZNF423Q2M1K9 1284 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 MYLK3Q32MK0 819 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 RBM20Q5T481 1227 aaKnown RBP13.2□□□□□ -0.3
CUL4A-203ENST00000375441 FNDC5Q8NAU1 212 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 ACVR1CQ8NER5 493 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 TRMOQ9BU70 441 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 BDH2Q9BUT1 245 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 RHOBTB2Q9BYZ6 727 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 TRMT6Q9UJA5 497 aaKnown RBP13.2□□□□□ -0.3
CUL4A-203ENST00000375441 SLC35E2BP0CK96 405 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 ATP6V1B2P21281 511 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 FMO4P31512 558 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 TRAF2Q12933 501 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.3
CUL4A-203ENST00000375441 PSMD5Q16401 504 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 MGAT5BQ3V5L5 792 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 ATP6AP1LQ52LC2 224 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 FBXL19Q6PCT2 694 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 ATP6V0D2Q8N8Y2 350 aa13.2□□□□□ -0.3
CUL4A-203ENST00000375441 TXNDC5Q8NBS9 432 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms