RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CSH1P0DML2 217 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 CSH2P0DML3 217 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 PTPN9P43378 593 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 RPL38P63173 70 aaKnown RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 IRF8Q02556 426 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 FSTL4Q6MZW2 842 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 NAT8LQ8N9F0 302 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 PCSK9Q8NBP7 692 aaKnown RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 LRRC15Q8TF66 581 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 KCTD15Q96SI1 283 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 NIFKQ9BYG3 293 aaKnown RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 DUX4Q9UBX2 424 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 TBC1D30Q9Y2I9 924 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 SNX8Q9Y5X2 465 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 COPG1Q9Y678 874 aaKnown RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 BBIP1A8MTZ0 92 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 KCNU1A8MYU2 1149 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 TK2O00142 265 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 ZBTB14O43829 449 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 USP46P62068 366 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 CDK18Q07002 472 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 FGD3Q5JSP0 725 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 GALNT15Q8N3T1 639 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 NXF3Q9H4D5 531 aaKnown RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 EBF3Q9H4W6 596 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 BTBD3Q9Y2F9 522 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 KLHL20Q9Y2M5 609 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 EFCAB10A6NFE3 127 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ADM5C9JUS6 153 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 H3BMM5 538 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 GPR25O00155 361 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ALDH9A1P49189 494 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 AQP4P55087 323 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 FBXW4P57775 412 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 RPS7P62081 194 aaKnown RBP11.59□□□□□ -0.55
PTCH1-203ENST00000375274 PURAQ00577 322 aaKnown RBP11.59□□□□□ -0.55
PTCH1-203ENST00000375274 DLG2Q15700 870 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 LSM12Q3MHD2 195 aaKnown RBP11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ADAMTSL2Q86TH1 951 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ADAM2Q99965 735 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 TIMMDC1Q9NPL8 285 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 H3BNX3 289 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 SLC22A3O75751 556 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 COX7A2P14406 83 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 TYMPP19971 482 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 PRDX6P30041 224 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 IDH3AP50213 366 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 LPIN1Q14693 890 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 C9orf57Q5W0N0 161 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 KRT73Q86Y46 540 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ZNF540Q8NDQ6 660 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 OR2T34Q8NGX1 318 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 OR2T3Q8NH03 318 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 BORCS5Q969J3 196 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 MYLPFQ96A32 169 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 MTFMTQ96DP5 389 aaKnown RBP11.59□□□□□ -0.55
PTCH1-203ENST00000375274 RNFT2Q96EX2 444 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 TINF2Q9BSI4 451 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 MLPHQ9BV36 600 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ASB8Q9H765 288 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 AHSPQ9NZD4 102 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ITGB1BP2Q9UKP3 347 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 SQORQ9Y6N5 450 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 FESP07332 822 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 HSPA14Q0VDF9 509 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 TRIQKQ629K1 86 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ZNF549Q6P9A3 640 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 AFTPHQ6ULP2 937 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 YAF2Q8IY57 180 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 ZNF567Q8N184 647 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 STARD8Q92502 1023 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 GPR20Q99678 358 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 CIPCQ9C0C6 399 aa11.59□□□□□ -0.55
PTCH1-203ENST00000375274 SPEF2Q9C093 1822 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 SLC15A5A6NIM6 579 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 JAK1P23458 1154 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 EPHX2P34913 555 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 FCGRTP55899 365 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 SEMA5AQ13591 1074 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 TSNQ15631 228 aaKnown RBP11.58□□□□□ -0.55
PTCH1-203ENST00000375274 PHKG1Q16816 387 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 RFX4Q33E94 735 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 DGKKQ5KSL6 1271 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 TOP6BLQ8N6T0 577 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 CLEC4DQ8WXI8 215 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.55
PTCH1-203ENST00000375274 NDEL1Q9GZM8 345 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.55
PTCH1-203ENST00000375274 AFDNP55196 1824 aaKnown RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 FGF1P05230 155 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 BEX3Q00994 111 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 PLCL1Q15111 1095 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 BRMS1LQ5PSV4 323 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 TXNDC11Q6PKC3 985 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 SAPCD2Q86UD0 394 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 CENPIQ92674 756 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ZHX1-C8orf76Q96EF9 292 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ABCB10Q9NRK6 738 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 PRKAG3Q9UGI9 489 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 DERAQ9Y315 318 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms