RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 WDR60Q8WVS4 1066 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ATL1Q8WXF7 558 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 MIS12Q9H081 205 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 KCNH6Q9H252 994 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 GOLPH3LQ9H4A5 285 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 LNPEPQ9UIQ6 1025 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ZNRF3Q9ULT6 936 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 NFE2L3Q9Y4A8 694 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 PCDHB5Q9Y5E4 795 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 SYCE1LA8MT33 242 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 TGFAP01135 160 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 CD40LGP29965 261 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ADSSP30520 456 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 MAT2AP31153 395 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 TMED10P49755 219 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 P2RX3P56373 397 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 NOMO1Q15155 1222 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 DDIASQ8IXT1 998 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 DIS3L2Q8IYB7 885 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 CCDC105Q8IYK2 499 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 CRYBG2Q8N1P7 616 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 LRRC46Q96FV0 321 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 INTS4Q96HW7 963 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 MED15Q96RN5 788 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 DMRTA2Q96SC8 542 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 LRRC1Q9BTT6 524 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 C11orf84Q9BUA3 381 aaPredicted RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 GPR62Q9BZJ7 368 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 KCNK13Q9HB14 408 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 VSX1Q9NZR4 365 aaPredicted RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 SAMD15Q9P1V8 674 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 CACNG2Q9Y698 323 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 MGAMO43451 1857 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ANKRD65E5RJM6 399 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 RASGRF2O14827 1237 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ANGPT2O15123 496 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 PCCBP05166 539 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ALPPP05187 535 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ALPPL2P10696 532 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 CYP2B6P20813 491 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 HMOX2P30519 316 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 RTP1P59025 263 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ALDH6A1Q02252 535 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 SNW1Q13573 536 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 DGKZQ13574 1117 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 TRMT10CQ7L0Y3 403 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 CDR2LQ86X02 465 aaPredicted RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 SLC44A5Q8NCS7 719 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ARHGEF26Q96DR7 871 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 NSMCE2Q96MF7 247 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 MRPL1Q9BYD6 325 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 MRPL15Q9P015 296 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 GULP1Q9UBP9 304 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 STRAPQ9Y3F4 350 aaKnown RBP9.1□□□□□ -0.95
UBR4-201ENST00000375218 MAD1L1Q9Y6D9 718 aa9.1□□□□□ -0.95
UBR4-201ENST00000375218 ZNF197O14709 1029 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 XPO1O14980 1071 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 RGS7P49802 495 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 ERVFC1P60507 584 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 RPS3AP61247 264 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 RPS8P62241 208 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 PHC1P78364 1004 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 CAPRIN1Q14444 709 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 CLEC16AQ2KHT3 1053 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 DAB2IPQ5VWQ8 1189 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 CCDC137Q6PK04 289 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 AFTPHQ6ULP2 937 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 SLC30A10Q6XR72 485 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 ZNF677Q86XU0 584 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 DSELQ8IZU8 1212 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 RCBTB1Q8NDN9 531 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 DNAJA4Q8WW22 397 aaPredicted RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 SEC14L1Q92503 715 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 RRNAD1Q96FB5 475 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 HTATIP2Q9BUP3 242 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 TXNDC16Q9P2K2 825 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 ITGA11Q9UKX5 1188 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 RPH3ALQ9UNE2 315 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 BCS1LQ9Y276 419 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 DMRT1Q9Y5R6 373 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 CSF1P09603 554 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 IGHMBP2P38935 993 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 NOMO3P69849 1222 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 GRAPQ13588 217 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 PGS1Q32NB8 556 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 NOMO2Q5JPE7 1267 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 DNAAF5Q86Y56 855 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 ZCCHC7Q8N3Z6 543 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 ATAD1Q8NBU5 361 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 GRAPLQ8TC17 118 aaPredicted RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 DQX1Q8TE96 717 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 ING5Q8WYH8 240 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 MVB12AQ96EY5 273 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 PRRG3Q9BZD7 231 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 QRSL1Q9H0R6 528 aaKnown RBP9.09□□□□□ -0.95
UBR4-201ENST00000375218 LZTFL1Q9NQ48 299 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 MROH7-TTC4A0A0A0MT08 1334 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 KBTBD13C9JR72 458 aa9.09□□□□□ -0.95
UBR4-201ENST00000375218 OGTO15294 1046 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms