RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ALLCQ8N6M5 410 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ANKRD52Q8NB46 1076 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ZNF540Q8NDQ6 660 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ATXN2Q99700 1313 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ULBP1Q9BZM6 244 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ACP6Q9NPH0 428 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 RPTORQ8N122 1335 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 A0A0A0MRY4 1105 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 GJB6O95452 261 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 DBTP11182 482 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 IL12AP29459 219 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 FMO4P31512 558 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 IL2P60568 153 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ENPEPQ07075 957 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 SLC5A9Q2M3M2 681 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 NOMO2Q5JPE7 1267 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 SPESP1Q6UW49 350 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ATG14Q6ZNE5 492 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 EIF3MQ7L2H7 374 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 TRMT11Q7Z4G4 463 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 POLNQ7Z5Q5 900 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 PSTKQ8IV42 348 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 STAG3L4Q8TBR4 150 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 PPP1R13LQ8WUF5 828 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 SPATA13Q96N96 652 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 TCF12Q99081 682 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 OSGEPL1Q9H4B0 414 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ALG9Q9H6U8 611 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 ATP13A1Q9HD20 1204 aa12.36□□□□□ -0.43
NPLOC4-202ENST00000374747 RBAK-RBAKDNI3L0D1 243 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 BIRC5O15392 142 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 PEX10O60683 326 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 CD52P31358 61 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 SLC26A3P40879 764 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 NOMO3P69849 1222 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 PCID2Q5JVF3 399 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 GPR107Q5VW38 600 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 LRRC49Q8IUZ0 686 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 BBS4Q96RK4 519 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 FAM105AQ9NUU6 356 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 CLN6Q9NWW5 311 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 CMTM6Q9NX76 183 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 ATXN10Q9UBB4 475 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 PRPF19Q9UMS4 504 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 TULP2O00295 520 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 RNASEH1O60930 286 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 ALOX5P09917 674 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 TYMPP19971 482 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 ZNF143P52747 638 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 SFSWAPQ12872 951 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 UBAP2LQ14157 1087 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 PFKFB4Q16877 469 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 DUPD1Q68J44 220 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 OFCC1Q8IZS5 231 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 STK40Q8N2I9 435 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 LENG9Q96B70 501 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 CERS2Q96G23 380 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 Q96MT0 163 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 ZCCHC2Q9C0B9 1178 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 ABCC13Q9NSE7 274 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 VPS51Q9UID3 782 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 IKZF3Q9UKT9 509 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 CRYL1Q9Y2S2 319 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 TSPAN3O60637 253 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 PTPN3P26045 913 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 NAA20P61599 178 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 LSM3P62310 102 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 LGALS3BPQ08380 585 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 ARHGAP36Q6ZRI8 547 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 SIAH1Q8IUQ4 282 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 DEPDC4Q8N2C3 294 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 TOP6BLQ8N6T0 577 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 GIPC3Q8TF64 312 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 USP7Q93009 1102 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 UXTQ9UBK9 157 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 RWDD3Q9Y3V2 267 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 CEP350Q5VT06 3117 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 HDAC3O15379 428 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 ZNF37AP17032 561 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 RCVRNP35243 200 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 GRIA4P48058 902 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 POLD2P49005 469 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 WNT8BQ93098 351 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 DGCR14Q96DF8 476 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 PGLYRP2Q96PD5 576 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 FAM126AQ9BYI3 521 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 BCAS3Q9H6U6 928 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 CATSPERZQ9NTU4 200 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 TMCO1Q9UM00 188 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 RAP2CQ9Y3L5 183 aa12.35□□□□□ -0.43
NPLOC4-202ENST00000374747 CCNIQ14094 377 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PLCL1Q15111 1095 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 NTPCRQ9BSD7 190 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 EURLQ9NYK6 297 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 MAPRE3Q9UPY8 281 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 UBE2QL1A1L167 161 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 AGPSO00116 658 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 USP17L7P0C7H9 530 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms